RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SCAMP3O14828 347 aaKnown RBP21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 GSTA4O15217 222 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 ZNF821O75541 412 aaPredicted RBP21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 CLDN9O95484 217 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 ALDH3A2P51648 485 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 CDH15P55291 814 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 CREMQ03060 361 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 CRTC1Q6UUV9 634 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 LRRC70Q7Z2Q7 622 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 ANKRD33Q7Z3H0 272 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 GFM2Q969S9 779 aaKnown RBP21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 SCRN2Q96FV2 425 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 HBEGFQ99075 208 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 SPG21Q9NZD8 308 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 LOC730098B7Z3J9 87 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 SEC22BO75396 215 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 ALBP02768 609 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 LAG3P18627 525 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 DAG1Q14118 895 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 GGTA1PQ4G0N0 100 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 RUNDC3AQ59EK9 446 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 CCNYL2Q5T2Q4 361 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 ATG9BQ674R7 924 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 USP45Q70EL2 814 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 LIX1Q8N485 282 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 ECHDC3Q96DC8 303 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 FBXL20Q96IG2 436 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 COPS8Q99627 209 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 SLC32A1Q9H598 525 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 PIF1Q9H611 641 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 NTN4Q9HB63 628 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 VAPAQ9P0L0 249 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 PCDHGA11Q9Y5H2 935 aa21.52■■□□□ 1.04
SMARCD2-201ENST00000225742 A0A1W2PQ67 120 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 ANKRD33BA6NCL7 494 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 FFAR3O14843 346 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 CLGNO14967 610 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 GPR42O15529 346 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 DFNA5O60443 496 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 C8GP07360 202 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 PFKLP17858 780 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 NFKBIAP25963 317 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 GDF5P43026 501 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 HNRNPFP52597 415 aaKnown RBP21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 EPS8Q12929 822 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 FAM174BQ3ZCQ3 159 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 DGKKQ5KSL6 1271 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 RGL4Q8IZJ4 473 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 GPR26Q8NDV2 337 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 ZNF548Q8NEK5 533 aaPredicted RBP21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 ZNF689Q96CS4 500 aaPredicted RBP21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 MAGEB10Q96LZ2 347 aaPredicted RBP21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 CFAP97Q9P2B7 532 aa21.51■■□□□ 1.03
SMARCD2-201ENST00000225742 IGLV3-16A0A075B6K0 115 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 NPIPB15A6NHN6 443 aaPredicted RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 UPK1AO00322 258 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 ERN1O75460 977 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 PGRP06401 933 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 MPC1LP0DKB6 136 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 PRPS2P11908 318 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 PRPH2P23942 346 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 ARSFP54793 590 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 PTGR1Q14914 329 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 USP39Q53GS9 565 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 NECAB2Q7Z6G3 386 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 ZNF420Q8TAQ5 688 aaPredicted RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 ASIC4Q96FT7 647 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 MCCC1Q96RQ3 725 aaPredicted RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 CPEB1Q9BZB8 566 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 TNKS2Q9H2K2 1166 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 DDX18Q9NVP1 670 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 DNAJB9Q9UBS3 223 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 DENND4CQ5VZ89 1909 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 ELOVL7A1L3X0 281 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 NPIPB8E9PQR5 432 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 SLC16A5O15375 505 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 SNAP29O95721 258 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 OR56A5P0C7T3 313 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 IL1RNP18510 177 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 PCSK6P29122 969 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 GKP32189 559 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 CD70P32970 193 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 ARHGEF7Q14155 803 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 MYBPC3Q14896 1274 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 DEFB115Q30KQ5 88 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 ZSWIM9Q86XI8 627 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 BBS7Q8IWZ6 715 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 SVOPLQ8N434 492 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 TMBIM1Q969X1 311 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 SDCCAG3Q96C92 435 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 CNDP2Q96KP4 475 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 LMLNQ96KR4 655 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 RPL10LQ96L21 214 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 THUMPD3Q9BV44 507 aaKnown RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 NPLQ9BXD5 320 aaPredicted RBP21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 SUV39H2Q9H5I1 410 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 MAGIXQ9H6Y5 334 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 MAN2B2Q9Y2E5 1009 aa21.5■■□□□ 1.03
SMARCD2-201ENST00000225742 TRAV19A0A0A6YYK7 116 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms