RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 LIPEQ05469 1076 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 PRAMEF14Q5SWL7 426 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 PRAMEF13Q5VWM6 474 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 ZFRQ96KR1 1074 aaKnown RBP18.13■□□□□ 0.49
CLIP2-201ENST00000223398 ART5Q96L15 291 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 PCDHB11Q9Y5F2 797 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 PMM2O15305 246 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 AHCYP23526 432 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 REP15Q6BDI9 236 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 SLC35G5Q96KT7 338 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 COQ7Q99807 217 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 AKAP12Q02952 1782 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 ERI3O43414 337 aaKnown RBP18.12■□□□□ 0.49
CLIP2-201ENST00000223398 LDB2O43679 373 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 RAB14P61106 215 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 NFKB2Q00653 900 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 SIM2Q14190 667 aaPredicted RBP18.12■□□□□ 0.49
CLIP2-201ENST00000223398 FAM174BQ3ZCQ3 159 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 CRELD2Q6UXH1 353 aaPredicted RBP18.12■□□□□ 0.49
CLIP2-201ENST00000223398 PIM3Q86V86 326 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 KBTBD2Q8IY47 623 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 AGAP11Q8TF27 550 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 CDH7Q9ULB5 785 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 PRPF19Q9UMS4 504 aaKnown RBP18.12■□□□□ 0.49
CLIP2-201ENST00000223398 MAGEB17A8MXT2 336 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 PCDH7O60245 1069 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 SIX3O95343 332 aaPredicted RBP18.12■□□□□ 0.49
CLIP2-201ENST00000223398 STK19P49842 368 aaPredicted RBP18.12■□□□□ 0.49
CLIP2-201ENST00000223398 SNAPC1Q16533 368 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 EEF1AKMT1Q8WVE0 214 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 IFNW1P05000 195 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 IL7RP16871 459 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 HOXC12P31275 282 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 RCVRNP35243 200 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 PTPRCAPQ14761 206 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 WDR45BQ5MNZ6 344 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 BROXQ5VW32 411 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 C11orf65Q8NCR3 313 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 CMASQ8NFW8 434 aaPredicted RBP18.12■□□□□ 0.49
CLIP2-201ENST00000223398 OR10A6Q8NH74 314 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 TRNT1Q96Q11 434 aaKnown RBP18.12■□□□□ 0.49
CLIP2-201ENST00000223398 C2orf78A6NCI8 922 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 FAM163BP0C2L3 166 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 RPS14P62263 151 aaKnown RBP18.12■□□□□ 0.49
CLIP2-201ENST00000223398 ERICH5Q6P6B1 374 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 KLHL17Q6TDP4 642 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 SLC34A3Q8N130 599 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 SFXN1Q9H9B4 322 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 SCNN1AP37088 669 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 MAGEA11P43364 429 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 PTDSS1P48651 473 aaKnown RBP18.12■□□□□ 0.49
CLIP2-201ENST00000223398 PNLIPRP1P54315 467 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 TAS1R3Q7RTX0 852 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 CCDC28BQ9BUN5 200 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 C15orf41Q9Y2V0 281 aa18.12■□□□□ 0.49
CLIP2-201ENST00000223398 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 TNFRSF11BO00300 401 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 TEX28O15482 410 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 GPR32O75388 356 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 FABP3P05413 133 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 POU2F1P14859 743 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 NCK1P16333 377 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 NDUFS1P28331 727 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 HADHBP55084 474 aaKnown RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 BTN3A2P78410 334 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 HMGCS1Q01581 520 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 KLF1Q13351 362 aaPredicted RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 OAFQ86UD1 273 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 IQCKQ8N0W5 287 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 KLHDC7BQ96G42 594 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 ALG2Q9H553 416 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 SLC22A14Q9Y267 594 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 CPSF4LA6NMK7 179 aaKnown RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 HCN1O60741 890 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 RGS20O76081 388 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 ALOX5P09917 674 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 TPRG1Q6ZUI0 275 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 TFGQ92734 400 aaPredicted RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 MRPS26Q9BYN8 205 aaKnown RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 PAIP2BQ9ULR5 123 aaKnown RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 RUVBL1Q9Y265 456 aaKnown RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 WFS1O76024 890 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 DLDP09622 509 aaKnown RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 CSTF2P33240 577 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 HCAR3P49019 387 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 AAK1Q2M2I8 961 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 DRICH1Q6PGQ1 229 aaPredicted RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 ADAMTS10Q9H324 1103 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 hCG_2039718K7EN88 272 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 REM1O75628 298 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 PAK4O96013 591 aaPredicted RBP18.11■□□□□ 0.49
CLIP2-201ENST00000223398 SLC25A24Q6NUK1 477 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 SLC30A6Q6NXT4 461 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 MZT2AQ6P582 158 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 MAMDC4Q6UXC1 1216 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 ABHD13Q7L211 337 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 GKN2Q86XP6 184 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 DCAF4L2Q8NA75 395 aa18.11■□□□□ 0.49
CLIP2-201ENST00000223398 B4GALT6Q9UBX8 382 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms