RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PRR23AA6NEV1 266 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 CCDC154A6NI56 674 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 C2orf81A6NN90 581 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 TPP1O14773 563 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 RGS5O15539 181 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 OR2B3O76000 313 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 B3GAT3O94766 335 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 ODC1P11926 461 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 PGAM1P18669 254 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 GNPDA1P46926 289 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 STX5Q13190 355 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 TNK1Q13470 666 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 ZBTB37Q5TC79 503 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 MFSD14CQ5VZR4 134 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 TYW3Q6IPR3 259 aaKnown RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 TMEM81Q6P7N7 255 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 ANKS3Q6ZW76 656 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 CHCHD4Q8N4Q1 142 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 FAR1Q8WVX9 515 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 LGALS12Q96DT0 336 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 PGLYRP2Q96PD5 576 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 TMEM168Q9H0V1 697 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 CHRAC1Q9NRG0 131 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 CACNA2D2Q9NY47 1150 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 KLHL8Q9P2G9 620 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 GMPR2Q9P2T1 348 aaKnown RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 NUFIP1Q9UHK0 495 aaKnown RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 MAGED2Q9UNF1 606 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 PCDHGB6Q9Y5F9 930 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 KLF2Q9Y5W3 355 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 AQP12BA6NM10 295 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 ALDOAP04075 364 aaKnown RBP13.38□□□□□ -0.27
GABPB1-201ENST00000220429 ASGR1P07306 291 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 DNAJB1P25685 340 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 CXCR3P49682 368 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 SNRPD2P62316 118 aaKnown RBP13.38□□□□□ -0.27
GABPB1-201ENST00000220429 TRAF3Q13114 568 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 BAMBIQ13145 260 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 BTBD16Q32M84 506 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 INTS6LQ5JSJ4 861 aaKnown RBP13.38□□□□□ -0.27
GABPB1-201ENST00000220429 C6orf141Q5SZD1 244 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 TPRG1LQ5T0D9 272 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 AQP12AQ8IXF9 295 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 C8orf59Q8N0T1 100 aaPredicted RBP13.38□□□□□ -0.27
GABPB1-201ENST00000220429 NCLNQ969V3 563 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 YIPF6Q96EC8 236 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 TEKT5Q96M29 485 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 NEDD4LQ96PU5 975 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 TMEM209Q96SK2 561 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 ZIC5Q96T25 663 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 PKMYT1Q99640 499 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 ACBD6Q9BR61 282 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 HDHD5Q9BXW7 423 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 TKTL2Q9H0I9 626 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 OR51B5Q9H339 312 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 WDCPQ9H6R7 721 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 CYB5R1Q9UHQ9 305 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 TLK1Q9UKI8 766 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 CDYLQ9Y232 598 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 PSAT1Q9Y617 370 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 BPTFQ12830 3046 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 SEPT4O43236 478 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 SNX4O95219 450 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 FCGR1AP12314 374 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 PTX3P26022 381 aaPredicted RBP13.38□□□□□ -0.27
GABPB1-201ENST00000220429 FLT3LGP49771 235 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 PRKCDQ05655 676 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 RUNX1T1Q06455 604 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 SP140Q13342 867 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 SMAD1Q15797 465 aaKnown RBP13.38□□□□□ -0.27
GABPB1-201ENST00000220429 LRRC26Q2I0M4 334 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 CES3Q6UWW8 571 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 PDZD4Q76G19 769 aaPredicted RBP13.38□□□□□ -0.27
GABPB1-201ENST00000220429 TAC4Q86UU9 113 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 LRRTM3Q86VH5 581 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 SPPL2CQ8IUH8 684 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 OR52K1Q8NGK4 314 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 AKAP1Q92667 903 aaKnown RBP eCLIP13.38□□□□□ -0.27
GABPB1-201ENST00000220429 RORBQ92753 470 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 CSNK1G3Q9Y6M4 447 aa13.38□□□□□ -0.27
GABPB1-201ENST00000220429 A0A0U1RQF3 1178 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 CIB4A0PJX0 185 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 LRRC72A6NJI9 287 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 E5RI56 91 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 F9P00740 461 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 CYP11A1P05108 521 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 PGRP06401 933 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 PROS1P07225 676 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 TNNI3P19429 210 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 MPSTP25325 297 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 HMGCLP35914 325 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 FAM26DQ5JW98 314 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 TXNDC11Q6PKC3 985 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 CFAP77Q6ZQR2 320 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 CDH26Q8IXH8 852 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 OR52H1Q8NGJ2 320 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 OR10T2Q8NGX3 314 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 ZFPM2Q8WW38 1151 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 KLHL6Q8WZ60 621 aa13.37□□□□□ -0.27
GABPB1-201ENST00000220429 CDADC1Q9BWV3 514 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms