RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 OR52J3Q8NH60 311 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 ESAMQ96AP7 390 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 RBM4BQ9BQ04 359 aaKnown RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 CCM2Q9BSQ5 444 aa18.63■□□□□ 0.57
SMPD3-201ENST00000219334 RBM4Q9BWF3 364 aaKnown RBP18.63■□□□□ 0.57
SMPD3-201ENST00000219334 CAPN14A8MX76 684 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 SOD2P04179 222 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 PRKCHP24723 683 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 ACADLP28330 430 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 FSTL5Q8N475 847 aaPredicted RBP18.62■□□□□ 0.57
SMPD3-201ENST00000219334 CNTD1Q8N815 330 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 OR4C6Q8NH72 309 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 MSX2P35548 267 aaPredicted RBP18.62■□□□□ 0.57
SMPD3-201ENST00000219334 SLC1A2P43004 574 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 SMCO1Q147U7 214 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 MYLK3Q32MK0 819 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 ADGRG6Q86SQ4 1221 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 TRIM63Q969Q1 353 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 TRIM2Q9C040 744 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 CLK4Q9HAZ1 481 aaKnown RBP18.62■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF282Q9UDV7 671 aaPredicted RBP18.62■□□□□ 0.57
SMPD3-201ENST00000219334 AP4B1Q9Y6B7 739 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 LTBP3Q9NS15 1303 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 UPK3BL1B0FP48 263 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 UPK3BL2E5RIL1 263 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 PLIN3O60664 434 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 RGS20O76081 388 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 F2P00734 622 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 TYRP14679 529 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 NCBP2P52298 156 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMPD3-201ENST00000219334 RAB25P57735 213 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 FASTKD3Q14CZ7 662 aaKnown RBP18.62■□□□□ 0.57
SMPD3-201ENST00000219334 TFB2MQ9H5Q4 396 aaKnown RBP18.62■□□□□ 0.57
SMPD3-201ENST00000219334 DNAAF2Q9NVR5 837 aaKnown RBP18.62■□□□□ 0.57
SMPD3-201ENST00000219334 TAF4O00268 1085 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 DNM1LO00429 736 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 ALPIP09923 528 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 KCNE1P15382 129 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 CSNK2A2P19784 350 aaPredicted RBP18.62■□□□□ 0.57
SMPD3-201ENST00000219334 GNALP38405 381 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 KCNJ2P63252 427 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 NFATC2Q13469 925 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 SIM2Q14190 667 aaPredicted RBP18.62■□□□□ 0.57
SMPD3-201ENST00000219334 DPY19L1Q2PZI1 675 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 PRAMEF14Q5SWL7 426 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 PRAMEF13Q5VWM6 474 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 MFSD5Q6N075 450 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 RAD9AQ99638 391 aa18.62■□□□□ 0.57
SMPD3-201ENST00000219334 A0A0J9YVX5 310 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 PIP5K1BO14986 540 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 NME6O75414 186 aaPredicted RBP18.61■□□□□ 0.57
SMPD3-201ENST00000219334 CLUP10909 449 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 KCNQ1P51787 676 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 ITPRIPL2Q3MIP1 535 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 ANO7Q6IWH7 933 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 P4HA3Q7Z4N8 544 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 GSTCDQ8NEC7 633 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 PJA1Q8NG27 643 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 OR5T3Q8NGG3 340 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 OR2AJ1Q8NGZ0 328 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 DCAKDQ8WVC6 231 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 RGS17Q9UGC6 210 aaPredicted RBP18.61■□□□□ 0.57
SMPD3-201ENST00000219334 PITPNM1O00562 1244 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 NPHS1O60500 1241 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 LCA5LO95447 670 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF30P17039 623 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 CCR10P46092 362 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF460Q14592 562 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 MLIPQ5VWP3 458 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 FAR1Q8WVX9 515 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 RFKQ969G6 155 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 DUSP26Q9BV47 211 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 TPD52L2O43399 206 aaKnown RBP18.61■□□□□ 0.57
SMPD3-201ENST00000219334 CRISP3P54108 245 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 DPYSQ14117 519 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF792Q3KQV3 632 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 SH3PXD2AQ5TCZ1 1133 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 DENND5AQ6IQ26 1287 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 DRICH1Q6PGQ1 229 aaPredicted RBP18.61■□□□□ 0.57
SMPD3-201ENST00000219334 LMX1AQ8TE12 382 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 AGAP11Q8TF27 550 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 GATA5Q9BWX5 397 aaPredicted RBP18.61■□□□□ 0.57
SMPD3-201ENST00000219334 RAPGEFL1Q9UHV5 662 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 IRS2Q9Y4H2 1338 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 PCDH7O60245 1069 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 PPP3R1P63098 170 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 SLC10A7Q0GE19 358 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 SLBPQ14493 270 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMPD3-201ENST00000219334 KCTD19Q17RG1 926 aaPredicted RBP18.61■□□□□ 0.57
SMPD3-201ENST00000219334 RASSF6Q6ZTQ3 369 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 GPR65Q8IYL9 337 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 PQLC1Q8N2U9 271 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 ARL10Q8N8L6 244 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 PHF24Q9UPV7 400 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 FADS3Q9Y5Q0 445 aa18.61■□□□□ 0.57
SMPD3-201ENST00000219334 VSTM5A8MXK1 200 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 HLA-DQB2P05538 268 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 HAPLN1P10915 354 aaPredicted RBP18.6■□□□□ 0.57
SMPD3-201ENST00000219334 UNGP13051 313 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms