RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 MEAF6Q9HAF1 191 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 TRIM17Q9Y577 477 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 NFS1Q9Y697 457 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 ABCA3Q99758 1704 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 MARF1Q9Y4F3 1742 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 LINC00854A0A1B0GVQ3 168 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 WNT7AO00755 349 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 UGT1A9O60656 530 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 USP12O75317 370 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 KLHL18O94889 574 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 APOL3O95236 402 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 HSD3B1P14060 373 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 UGT1A6P19224 532 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 TNNI3P19429 210 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 ENDOUP21128 410 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 UGT1A1P22309 533 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 UGT1A4P22310 534 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 HSD3B2P26439 372 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 NDUFS1P28331 727 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 GALK1P51570 392 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 PAFAH1B3Q15102 231 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 NOL9Q5SY16 702 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 SH3PXD2AQ5TCZ1 1133 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 DCAF12L1Q5VU92 463 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 ANKRD22Q5VYY1 191 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 ANO7Q6IWH7 933 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 TMEM17Q86X19 198 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 DENND1AQ8TEH3 1009 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 DNAJA4Q8WW22 397 aaPredicted RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 ACDQ96AP0 544 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 RANBP9Q96S59 729 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 GPR20Q99678 358 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 ZSCAN5AQ9BUG6 496 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 UGT1A7Q9HAW7 530 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 UGT1A10Q9HAW8 530 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 UGT1A8Q9HAW9 530 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 TMPRSS4Q9NRS4 437 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 GDAP2Q9NXN4 497 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 SLC7A8Q9UHI5 535 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 OR2AG2A6NM03 316 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 BHMG1C9JSJ3 638 aaPredicted RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 NME6O75414 186 aaPredicted RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 ZMPSTE24O75844 475 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 OR5F1O95221 314 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 CLCN4P51793 760 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 SOX10P56693 466 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 SLC25A11Q02978 314 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 POU4F2Q12837 409 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 MAB21L1Q13394 359 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 KIAA1614Q5VZ46 1190 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 AHSA2Q719I0 299 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 SAMD7Q7Z3H4 446 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 LRTOMTQ8WZ04 291 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 C1GALT1C1Q96EU7 318 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 CNDP2Q96KP4 475 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 GAD1Q99259 594 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 EVA1AQ9H8M9 152 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 TMEM5Q9Y2B1 443 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 RAI2Q9Y5P3 530 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 ILVBLA1L0T0 632 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 LCHNA4D1U4 455 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 FFAR3O14843 346 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 GPR42O15529 346 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 EEDO75530 441 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 ZNF432O94892 652 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 PRAMEF1O95521 474 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 RPIAP49247 311 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 CRISP3P54108 245 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 OR2B6P58173 313 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 PPP3R1P63098 170 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 BRAT1Q6PJG6 821 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 ZNF517Q6ZMY9 492 aaPredicted RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 USP30Q70CQ3 517 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 DENND1CQ8IV53 801 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 GID4Q8IVV7 300 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 KIAA0319LQ8IZA0 1049 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 FAM98AQ8NCA5 519 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 ZNF548Q8NEK5 533 aaPredicted RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 OR5B17Q8NGF7 314 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 STON2Q8WXE9 905 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 KLHL6Q8WZ60 621 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 SLC22A18Q96BI1 424 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 C11orf24Q96F05 449 aaPredicted RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 COL21A1Q96P44 957 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 OMDQ99983 421 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 TCF25Q9BQ70 676 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 MRPL45Q9BRJ2 306 aaKnown RBP4.34□□□□□ -1.71
CHD9-201ENST00000219084 COQ10BQ9H8M1 238 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 IPPKQ9H8X2 491 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 VRTNQ9H8Y1 702 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 FAM105AQ9NUU6 356 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 EGFL7Q9UHF1 273 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 PCDHGA3Q9Y5H0 932 aa4.34□□□□□ -1.71
CHD9-201ENST00000219084 A8MUI8 341 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 GNB5O14775 395 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 ARPC2O15144 300 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 PDPK1O15530 556 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 TLR5O60602 858 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 TBX10O75333 385 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms