RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 CCDC154A6NI56 674 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 OR2AG2A6NM03 316 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 PEX1O43933 1283 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 C8BP07358 591 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 PRKG2Q13237 762 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 BEND7Q8N7W2 519 aaPredicted RBP29.03■■■□□ 2.24
PABPN1-201ENST00000216727 RASGEF1AQ8N9B8 481 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 TERB1Q8NA31 727 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 ARRDC3Q96B67 414 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 KLHL4Q9C0H6 718 aa29.03■■■□□ 2.24
PABPN1-201ENST00000216727 LEF1Q9UJU2 399 aaPredicted RBP29.03■■■□□ 2.24
PABPN1-201ENST00000216727 KIF26AQ9ULI4 1882 aaPredicted RBP29.02■■■□□ 2.24
PABPN1-201ENST00000216727 ASPDHA6ND91 283 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 GRXCR2A6NFK2 248 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 PRLHRP49683 370 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 ZNF234Q14588 700 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 MAP7D1Q3KQU3 841 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 GGTA1PQ4G0N0 100 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 C6orf10Q5SRN2 563 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 ZNF648Q5T619 568 aaPredicted RBP29.02■■■□□ 2.24
PABPN1-201ENST00000216727 SPATA24Q86W54 205 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 ZFAND4Q86XD8 727 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 N4BP2L2Q92802 583 aaPredicted RBP29.02■■■□□ 2.24
PABPN1-201ENST00000216727 P2RY13Q9BPV8 354 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 KLQ9UEF7 1012 aa29.02■■■□□ 2.24
PABPN1-201ENST00000216727 MANBAO00462 879 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 AREL1O15033 823 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 SLC6A2P23975 617 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 IL12AP29459 219 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 METAP1P53582 386 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 MAD2L1Q13257 205 aaPredicted RBP29.01■■■□□ 2.24
PABPN1-201ENST00000216727 TRIP10Q15642 601 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 RFTN2Q52LD8 501 aaPredicted RBP29.01■■■□□ 2.24
PABPN1-201ENST00000216727 FBXL19Q6PCT2 694 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 SLC15A3Q8IY34 581 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 VPS33AQ96AX1 596 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 PPP1R16AQ96I34 528 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 SLC45A3Q96JT2 553 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 FAM129BQ96TA1 746 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 WRAP53Q9BUR4 548 aaKnown RBP29.01■■■□□ 2.24
PABPN1-201ENST00000216727 IL1RL2Q9HB29 575 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 BATF3Q9NR55 127 aa29.01■■■□□ 2.24
PABPN1-201ENST00000216727 TCF20Q9UGU0 1960 aaKnown RBP29.01■■■□□ 2.23
PABPN1-201ENST00000216727 PRSS51A0A1B0GVH4 220 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 NME4O00746 187 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 FFAR3O14843 346 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 GPR42O15529 346 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 ATG13O75143 517 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 GSTM1P09488 218 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 G6PDP11413 515 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 PEX2P28328 305 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 GSTM4Q03013 218 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 TMEM115Q12893 351 aaPredicted RBP29.01■■■□□ 2.23
PABPN1-201ENST00000216727 TLR1Q15399 786 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 OGFRL1Q5TC84 451 aaPredicted RBP29.01■■■□□ 2.23
PABPN1-201ENST00000216727 IL23RQ5VWK5 629 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 TANGO2Q6ICL3 276 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 CYP20A1Q6UW02 462 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 ZNF765Q7L2R6 523 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 EPHX3Q9H6B9 360 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 ACTR8Q9H981 624 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 ZFP14Q9HCL3 533 aa29.01■■■□□ 2.23
PABPN1-201ENST00000216727 ZNF490Q9ULM2 529 aaPredicted RBP29.01■■■□□ 2.23
PABPN1-201ENST00000216727 KIAA1549LQ6ZVL6 1849 aa29■■■□□ 2.23
PABPN1-201ENST00000216727 ANKRD28O15084 1053 aa29■■■□□ 2.23
PABPN1-201ENST00000216727 NPPAP01160 153 aa29■■■□□ 2.23
PABPN1-201ENST00000216727 HSD17B1P14061 328 aa29■■■□□ 2.23
PABPN1-201ENST00000216727 CTSCP53634 463 aa29■■■□□ 2.23
PABPN1-201ENST00000216727 ATXN3P54252 364 aaPredicted RBP29■■■□□ 2.23
PABPN1-201ENST00000216727 RHDQ02161 417 aa29■■■□□ 2.23
PABPN1-201ENST00000216727 FCHO2Q0JRZ9 810 aa29■■■□□ 2.23
PABPN1-201ENST00000216727 LPCAT4Q643R3 524 aa29■■■□□ 2.23
PABPN1-201ENST00000216727 GLMNQ92990 594 aa29■■■□□ 2.23
PABPN1-201ENST00000216727 ACTL8Q9H568 366 aa29■■■□□ 2.23
PABPN1-201ENST00000216727 IFRD1O00458 451 aaPredicted RBP28.99■■■□□ 2.23
PABPN1-201ENST00000216727 TSPAN6O43657 245 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 KRT6AP02538 564 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 KRT6BP04259 564 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 JAK1P23458 1154 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 KRT6CP48668 564 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 PTCHD3Q3KNS1 767 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 VITQ6UXI7 678 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 NLRP8Q86W28 1048 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 PDSS2Q86YH6 399 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 DUS3LQ96G46 650 aaKnown RBP28.99■■■□□ 2.23
PABPN1-201ENST00000216727 CCM2Q9BSQ5 444 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 NFYCQ13952 458 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 CPA6Q8N4T0 437 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 UCMAQ8WVF2 138 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 FARSBQ9NSD9 589 aaKnown RBP28.99■■■□□ 2.23
PABPN1-201ENST00000216727 CMTM6Q9NX76 183 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 ASIC5Q9NY37 505 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 RIMS3Q9UJD0 308 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 PCDHA9Q9Y5H5 950 aa28.99■■■□□ 2.23
PABPN1-201ENST00000216727 TCRBV3S1A0A5B6 114 aa28.98■■■□□ 2.23
PABPN1-201ENST00000216727 TMEM202A6NGA9 273 aa28.98■■■□□ 2.23
PABPN1-201ENST00000216727 PSIP1O75475 530 aaKnown RBP28.98■■■□□ 2.23
PABPN1-201ENST00000216727 ADRB3P13945 408 aa28.98■■■□□ 2.23
PABPN1-201ENST00000216727 SLC2A4P14672 509 aa28.98■■■□□ 2.23
PABPN1-201ENST00000216727 GNPDA1P46926 289 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms