RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ERI3O43414 337 aaKnown RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 PGM3O95394 542 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 SERPINB1P30740 379 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 RAPSNQ13702 412 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 GPR33Q49SQ1 333 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 CLEC6AQ6EIG7 209 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 KIAA1211LQ6NV74 962 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 GPR151Q8TDV0 419 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 SCAMP4Q969E2 229 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 ZNF607Q96SK3 696 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 SERPINB7O75635 380 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 IDH2P48735 452 aaKnown RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 TOR1AIP1Q5JTV8 583 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 ANKRD22Q5VYY1 191 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 GK5Q6ZS86 529 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 KBTBD2Q8IY47 623 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 THAP3Q8WTV1 239 aaPredicted RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 NXNL1Q96CM4 212 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 FNDC11Q9BVV2 318 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 IRF2BPLQ9H1B7 796 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 ADAP2Q9NPF8 381 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 NUDT4Q9NZJ9 180 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 MAP4K5Q9Y4K4 846 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 C2orf74A8MZ97 194 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 CDC123O75794 336 aaPredicted RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 CD6P30203 668 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 CDH5P33151 784 aaPredicted RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 SLC6A11P48066 632 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 GALNT5Q7Z7M9 940 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 PIM3Q86V86 326 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 RALGPS2Q86X27 583 aaPredicted RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 DENND6AQ8IWF6 608 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 BPIFB6Q8NFQ5 453 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 OR4K17Q8NGC6 315 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 TBL1XR1Q9BZK7 514 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 ALG2Q9H553 416 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 LRRC19Q9H756 370 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 SH3BGRL2Q9UJC5 107 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 NOCTQ9UK39 431 aaKnown RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 TSC22D4Q9Y3Q8 395 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 KIF1CO43896 1103 aaKnown RBP13.49□□□□□ -0.25
SIX4-201ENST00000216513 VEGFDO43915 354 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 SEC24AO95486 1093 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 ENPEPQ07075 957 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 CARTPTQ16568 116 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 VPS26BQ4G0F5 336 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 NAIF1Q69YI7 327 aaPredicted RBP13.49□□□□□ -0.25
SIX4-201ENST00000216513 CRELD2Q6UXH1 353 aaPredicted RBP13.49□□□□□ -0.25
SIX4-201ENST00000216513 CLVS1Q8IUQ0 354 aaPredicted RBP13.49□□□□□ -0.25
SIX4-201ENST00000216513 MIEF2Q96C03 454 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 TMLHEQ9NVH6 421 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 K7ERQ8 282 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 NOL4O94818 638 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 GNAZP19086 355 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 MYBPC1Q00872 1141 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 DPYSL2Q16555 572 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 ZSWIM7Q19AV6 140 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 COL13A1Q5TAT6 717 aaPredicted RBP13.49□□□□□ -0.25
SIX4-201ENST00000216513 COX18Q8N8Q8 333 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 NUP98P52948 1817 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 NID2Q14112 1375 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 NIPSNAP2O75323 286 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 FHP07954 510 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 DEFA1P59665 94 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 DEFA3P59666 94 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 TMEM115Q12893 351 aaPredicted RBP13.49□□□□□ -0.25
SIX4-201ENST00000216513 TRIM61Q5EBN2 209 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 UBE2J2Q8N2K1 259 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 IGSF8Q969P0 613 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 RNF121Q9H920 327 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 CNOT6Q9ULM6 557 aaKnown RBP13.49□□□□□ -0.25
SIX4-201ENST00000216513 SNX7Q9UNH6 387 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 NOX1Q9Y5S8 564 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 TCRBV9S1A1TA0A576 114 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 CDC7O00311 574 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 TPST2O60704 377 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 CLPTM1O96005 669 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 TPSB2P20231 275 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 TPSAB1Q15661 275 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 TMEM31Q5JXX7 168 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 FOXR2Q6PJQ5 311 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 TUBGCP5Q96RT8 1024 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 MTERF1Q99551 399 aaKnown RBP13.49□□□□□ -0.25
SIX4-201ENST00000216513 CLSTN3Q9BQT9 956 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 LRTM1Q9HBL6 345 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 MAGEA13PA6NCF6 341 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 FAM155AB1AL88 458 aaPredicted RBP13.49□□□□□ -0.25
SIX4-201ENST00000216513 M0R2N6 131 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 LATO43561 262 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 YAP1P46937 504 aaKnown RBP13.49□□□□□ -0.25
SIX4-201ENST00000216513 JAM2P57087 298 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 ZNF234Q14588 700 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 CDKN3Q16667 212 aa13.49□□□□□ -0.25
SIX4-201ENST00000216513 FSCN2O14926 492 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 LDOC1O95751 146 aaPredicted RBP13.48□□□□□ -0.25
SIX4-201ENST00000216513 KLF1Q13351 362 aaPredicted RBP13.48□□□□□ -0.25
SIX4-201ENST00000216513 SLBPQ14493 270 aaKnown RBP eCLIP13.48□□□□□ -0.25
SIX4-201ENST00000216513 AKIRIN2Q53H80 203 aa13.48□□□□□ -0.25
SIX4-201ENST00000216513 SULT1C3Q6IMI6 304 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms