RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 SPATA31C2B4DYI2 1134 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 FANCGO15287 622 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 NUAK1O60285 661 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 TRBC1P01850 177 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 IFNW1P05000 195 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 DLDP09622 509 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 PPM1AP35813 382 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 RBM34P42696 430 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 HNRNPFP52597 415 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 HADHBP55084 474 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 NFATC3Q12968 1075 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 TAF13Q15543 124 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 USP41Q3LFD5 358 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 SYVN1Q86TM6 617 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 AURKBQ96GD4 344 aaPredicted RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 PIWIL1Q96J94 861 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 RPF2Q9H7B2 306 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 NDOR1Q9UHB4 597 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 MSRAQ9UJ68 235 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 RPL36Q9Y3U8 105 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 SH3D21A4FU49 640 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 TBC1D3BA6NDS4 549 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 MEIS2O14770 477 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 RFPL1O75677 317 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 CD2P06729 351 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 GRM5P41594 1212 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 NUDT6P53370 316 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 PCDH1Q08174 1060 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 MOGSQ13724 837 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 TCEA2Q15560 299 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 VMACQ2NL98 169 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 PRAMEF17Q5VTA0 474 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 KIAA0319LQ8IZA0 1049 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 PLD5Q8N7P1 536 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 DCBLD1Q8N8Z6 715 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 LILRB4Q8NHJ6 448 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 CREB3L1Q96BA8 519 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 CCDC120Q96HB5 630 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 MUS81Q96NY9 551 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 FAIM2Q9BWQ8 316 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 CST11Q9H112 138 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 FAM83DQ9H4H8 585 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 BPIFA1Q9NP55 256 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 TVP23BQ9NYZ1 205 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 MAT2BQ9NZL9 334 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 C5orf51A6NDU8 294 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 FAM86C2PA6NEL3 165 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 CDKL1Q00532 357 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 PIGFQ07326 219 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 LCP2Q13094 533 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 CAPSQ13938 189 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 GRB14Q14449 540 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 FBXO48Q5FWF7 155 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 DCLRE1AQ6PJP8 1040 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 MON1BQ7L1V2 547 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 TOP6BLQ8N6T0 577 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 APOLD1Q96LR9 279 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 MGME1Q9BQP7 344 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 IKZF4Q9H2S9 585 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 ZNF358Q9NW07 568 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 ZNF510Q9Y2H8 683 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 FKBP7Q9Y680 259 aa10.27□□□□□ -0.76
VCL-201ENST00000211998 A8MX80 341 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 DCLK1O15075 740 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 ADH1AP07327 375 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 PIRTP0C851 137 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 CTSEP14091 401 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 MMP8P22894 467 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 ARFIP1P53367 373 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 PSMA6P60900 246 aaKnown RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 CDK18Q07002 472 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 KLHL22Q53GT1 634 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 PPP1R26Q5T8A7 1209 aaPredicted RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 ZNF730Q6ZMV8 503 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 TPGS1Q6ZTW0 290 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 CHSY3Q70JA7 882 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 OR4L1Q8NH43 312 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 DNAJA4Q8WW22 397 aaPredicted RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 MIPEPQ99797 713 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 ELL3Q9HB65 397 aaPredicted RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 BEX1Q9HBH7 125 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 NUDT15Q9NV35 164 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 CNTN6Q9UQ52 1028 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 TXNL4AP83876 142 aaKnown RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 ZNF460Q14592 562 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 CDKL4Q5MAI5 379 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 GCNT6Q5T4J0 391 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 DRICH1Q6PGQ1 229 aaPredicted RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 MSANTD1Q6ZTZ1 278 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 ANKRD46Q86W74 232 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 RFKQ969G6 155 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 TMIGD2Q96BF3 282 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 PPCDCQ96CD2 204 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 MFSD3Q96ES6 412 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 KCTD15Q96SI1 283 aaPredicted RBP10.27□□□□□ -0.77
VCL-201ENST00000211998 CCDC106Q9BWC9 280 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 ASB8Q9H765 288 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 CPNE5Q9HCH3 593 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 OR6C75A6NL08 312 aa10.27□□□□□ -0.77
VCL-201ENST00000211998 IFNGP01579 166 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms