RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Zfp945E9PYM8 794 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn2r6H3BK29 913 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ccdc153P0C7Q1 202 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cd1d1P11609 336 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cd1d2P11610 336 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 BckdhaP50136 442 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 GlaP51569 419 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cdh8P97291 799 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 VrtnQ3SYK4 740 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Grm5Q3UVX5 1203 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Sfmbt2Q5DTW2 938 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Scube3Q66PY1 993 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tusc1Q673H1 205 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zfp341Q6PGC9 846 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 TbckQ8BM85 762 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Larp4Q8BWW4 719 aaKnown RBP9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 EloaQ8CB77 773 aaKnown RBP9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 GmdsQ8K0C9 372 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Q8K207 121 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Colgalt1Q8K297 617 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 SdhaQ8K2B3 664 aaKnown RBP9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr1310Q8VF85 312 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr352Q8VGJ9 315 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 PclafQ9CQX4 110 aaKnown RBP9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Akr1c12Q9JLI0 323 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Clca3a1Q9QX15 902 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Acox2Q9QXD1 681 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Limd1Q9QXD8 668 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Magel2Q9QZ04 1284 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Katna1Q9WV86 491 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cacna1sQ02789 1880 aa9.58□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 A0A286YDU1 74 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ube4aE9Q735 1028 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dpysl4O35098 572 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Slc2a2P14246 523 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Bmi1P25916 324 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 AhrP30561 848 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 CtskP55097 329 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Lpar1P61793 364 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ybx1P62960 322 aaKnown RBP9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ctps2P70303 586 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Atxn7l3bQ3UD01 97 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rbm20Q3UQS8 1199 aaKnown RBP9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Krt33bQ61897 404 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Sez6lQ6P1D5 963 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rtl3Q6P1Y1 553 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cyp2r1Q6VVW9 501 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Svs1Q6WIZ7 820 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mrgprb8Q7TN51 330 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Avl9Q80U56 649 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rims3Q80U57 307 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dars2Q8BIP0 653 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cmtr2Q8BWQ4 767 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Sirt5Q8K2C6 310 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Sbk1Q8QZX0 417 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn1r200Q8R281 312 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Elovl6Q920L5 267 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 HlcsQ920N2 722 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr702Q920Z2 318 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Slc25a46Q9CQS4 418 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Lrrc69Q9D9Q0 347 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cyb5r1Q9DB73 305 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 TrilQ9DBY4 809 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Eif3gQ9Z1D1 320 aaKnown RBP9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rgs6Q9Z2H2 472 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cacna1fQ9JIS7 1985 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Kmt2eQ3UG20 1868 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Prdm12A2AJ77 365 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Enthd1E9Q1Z2 618 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gstp3F6RWR5 210 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn1r58G3X9U3 310 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm21800J3QMJ9 180 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Adam7O35227 789 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Btnl2O70355 454 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Il1rnP25085 178 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Nr2f6P43136 390 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 AhcyP50247 432 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rras2P62071 204 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cct3P80318 545 aaKnown RBP9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ano7Q14AT5 859 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 YdjcQ14BV6 310 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dtx3lQ3UIR3 748 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dsg1aQ61495 1057 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 OgnQ62000 298 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dlx3Q64205 287 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 PigsQ6PD26 555 aaKnown RBP9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tas2r115Q7M719 310 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rnf139Q7TMV1 668 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 NarflQ7TMW6 476 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Q8BGN9 141 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zc3h14Q8BJ05 735 aaKnown RBP9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ugt2b35Q8BJL9 529 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Plekhm3Q8BM47 761 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Adamts4Q8BNJ2 833 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gjd4Q8BSD4 364 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Kank2Q8BX02 843 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 SgczQ8BX51 311 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Sec22cQ8BXT9 303 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Pak5Q8C015 719 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 TrhdeQ8K093 1025 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms