RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Znf24Q91VN1 368 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Dpy30Q99LT0 99 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Msh4Q99MT2 958 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Det1Q9D0A0 550 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Snx5Q9D8U8 404 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Plscr1Q9JJ00 328 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Prokr1Q9JKL1 393 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Celf2Q9Z0H4 508 aaKnown RBP9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm30302A0A1Y7VN40 1110 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vmn2r21K7N6Y7 853 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vmn2r20L7N2B1 853 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Folr1P35846 255 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Zfp39Q02525 718 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 WhammQ571B6 793 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Spata48Q5NC83 441 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Trpc1Q61056 793 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 MyorgQ69ZQ1 716 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 ManealQ6P1J0 452 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Lix1Q6P566 282 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Kif18bQ6PFD6 834 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr412Q7TRW7 312 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Epb41l5Q8BGS1 731 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Q8BHR8 331 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Chst8Q8BQ86 417 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 MaelQ8BVN9 434 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Dapk2Q8VDF3 370 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gpn2Q8VEJ1 310 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Pcdhb21Q91V48 774 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Paip2bQ91W45 136 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Mrps18bQ99N84 254 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Tmem9Q9CR23 183 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Glod5Q9D8I3 148 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 TesclQ9DAJ7 231 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 TrilQ9DBY4 809 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Akap8lQ9R0L7 642 aaKnown RBP9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Dnah12Q3V0Q1 3086 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Prr14lE9Q7C4 1971 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Pkd2l1A2A259 760 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ism1A2ATD1 454 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gabrr3B2RXA8 464 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm2237E9Q501 211 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Adh6aE9Q5Z6 375 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm3591K7N6X2 186 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Stx7O70439 261 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Scg5P12961 212 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ugt2b17P17717 530 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Pold1P52431 1105 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ms4a15Q3UPL6 245 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ltbp3Q61810 1268 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr1036Q7TR85 310 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Zbtb24Q80X44 710 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Txndc11Q8K2W3 948 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vmn1r18Q8R2C8 299 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr348Q8VGK3 313 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ugt2b38Q91WH2 530 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Tcam1Q99NB3 548 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ifitm3Q9CQW9 137 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Epm2aQ9WUA5 330 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Zbtb18Q9WUK6 522 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cylc2B1AWN8 422 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Mterf1bB9EJ57 379 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm8237E9Q257 205 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 H2-M9O19442 342 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ech1O35459 327 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gtf2h4O70422 463 aaKnown RBP9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 GzmcP08882 248 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 MaptP10637 733 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Grik2P39087 908 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Mapkapk2P49138 386 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Rps3P62908 243 aaKnown RBP9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 NficP70255 439 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 TekQ02858 1122 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Emx2Q04744 253 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Tnks2Q3UES3 1166 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Pcgf5Q3UK78 256 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cdk15Q3V3A1 433 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 RhocQ62159 193 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Eif2s1Q6ZWX6 315 aaKnown RBP9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cyth4Q80YW0 393 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Susd6Q8BGE4 302 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Serpinb9dQ8BMT0 377 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Zmym6Q8BS54 1249 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Dcaf12l1Q8CBW4 501 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Rgs18Q99PG4 235 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ovca2Q9D7E3 225 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Pidd1Q9ERV7 915 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Sirpb1aA0A0A6YYP6 397 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm13040A2A8C4 496 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm13101A2ASJ0 481 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm13119B1ARV5 481 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Apol11bE9PUZ0 337 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Alkal1J3QPP8 127 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Sod3O09164 251 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 S100a9P31725 113 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 OstnP61364 130 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Crisp1Q03401 244 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Eif2ak2Q03963 515 aaKnown RBP9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Clca4bQ3UW98 925 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Bhlha9Q5RJB0 231 aa9.61□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cpa6Q5U901 438 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms