RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ppp1r2Q9DCL8 206 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Slco1a4Q9EP96 670 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Rdh11Q9QYF1 316 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 HaspinQ9Z0R0 754 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Btbd35f28A2CFD5 498 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Vmn1r238E9Q373 306 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Btbd35f30J3QML3 498 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Smad6O35182 495 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zw10O54692 779 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Kcnj13P86046 360 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 PrkczQ02956 592 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Nfe2l2Q60795 597 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Q6PAC4 1279 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 1700001J03RikQ80ZR8 219 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ofcc1Q8BGX4 166 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 B3gnt5Q8BGY6 376 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pik3cbQ8BTI9 1064 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Smoc2Q8CD91 447 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Hmgcs1Q8JZK9 520 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Vmn1r203Q8R273 311 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr807Q8VGI9 311 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Lgals12Q91VD1 314 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 DeraQ91YP3 318 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 PpidQ9CR16 370 aaKnown RBP15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Tmem8aQ9ESN3 769 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pkp3Q9QY23 797 aa15.94■□□□□ 0.14
Trim28-201ENSMUST00000005705 Plxna1P70206 1894 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Igkv10-96A0A140T8M1 115 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Faap100A2ACJ2 879 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ttll9A2APC3 461 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zfp992B1ASD8 573 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Clip3B9EHT4 547 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Npr1P18293 1057 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pcyt1aP49586 367 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Dpf3P58269 378 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Smpdl3aP70158 445 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Glb1l2Q3UPY5 636 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Arhgef15Q5FWH6 849 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Prm3Q62100 101 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Wipi2Q80W47 445 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Snx16Q8C080 344 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zfp991Q8R1N3 573 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Eml3Q8VC03 897 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Depdc7Q91WS7 511 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 5530400C23RikQ9D3I0 173 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ndst3Q9EQH7 873 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Plce1Q8K4S1 2282 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gm2237E9Q501 211 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gm21897J3KMP5 500 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gm3591K7N6X2 186 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gm21750L7N228 499 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 AprtP08030 180 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gria1P23818 907 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Kcnab2P62482 367 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Q3U7U4 132 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Slc35b4Q8CIA5 331 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 AcmsdQ8R519 336 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr847Q8VFF4 312 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 DgkgQ91WG7 788 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Oas1cQ924S2 362 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Msh4Q99MT2 958 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 AasdhpptQ9CQF6 309 aa15.93■□□□□ 0.14
Trim28-201ENSMUST00000005705 Xpnpep3B7ZMP1 506 aaKnown RBP15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Mterf1bB9EJ57 379 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zfp938E9Q9G3 579 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pabpc4lG5E8X2 370 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Lire1P11260 357 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ifrd1P19182 449 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Etv4P28322 485 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gadd45aP48316 165 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Inpp1P49442 396 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 BcheQ03311 603 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Kir3dl2Q673W2 388 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Slain1Q68FF7 579 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pfkfb4Q6DTY7 469 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 RbfaQ6P3B9 350 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pcdhb21Q91V48 774 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ptgr1Q91YR9 329 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Coro6Q920M5 471 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Aco2Q99KI0 780 aaKnown RBP15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 CatsperzQ9CQP8 194 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Tex19.2Q9D5S1 317 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Hm13Q9D8V0 378 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Rhobtb1Q9DAK3 695 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 B9d1Q9R1S0 204 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Pappa2E9PZ87 1789 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gm21885A0A286YDN8 145 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Calhm3J3QMI4 347 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 AlyrefO08583 255 aaKnown RBP15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Slc22a8O88909 537 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Odc1P00860 461 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Hoxc8P09025 242 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Hmga1P17095 107 aaKnown RBP15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Folr1P35846 255 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 TekQ02858 1122 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Phlda1Q62392 405 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 A4galtQ67BJ4 359 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Tatdn1Q6P8M1 295 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 NapepldQ8BH82 396 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gjc2Q8BQU6 440 aa15.92■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms