RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 BNC1Q01954 994 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 GRIK2Q13002 908 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 MPP2Q14168 576 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 OR4D1Q15615 310 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 CCDC153Q494R4 210 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 UBE2R2Q712K3 238 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-230ENST00000641927 PDZD3Q86UT5 571 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 NRROSQ86YC3 692 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 STAG3L4Q8TBR4 150 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 KIAA1191Q96A73 305 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 ELF4Q99607 663 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-230ENST00000641927 PAIP2Q9BPZ3 127 aaKnown RBP17.08■□□□□ 0.32
PHGDH-230ENST00000641927 MRPL57Q9BQC6 102 aaKnown RBP17.08■□□□□ 0.32
PHGDH-230ENST00000641927 MRPL46Q9H2W6 279 aaKnown RBP17.08■□□□□ 0.32
PHGDH-230ENST00000641927 TFB2MQ9H5Q4 396 aaKnown RBP17.08■□□□□ 0.32
PHGDH-230ENST00000641927 UTP6Q9NYH9 597 aaKnown RBP17.08■□□□□ 0.32
PHGDH-230ENST00000641927 ADAMTS6Q9UKP5 1117 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 EMCNQ9ULC0 261 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 SLC6A14Q9UN76 642 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 WDR37Q9Y2I8 494 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 CFAP20Q9Y6A4 193 aaKnown RBP17.08■□□□□ 0.32
PHGDH-230ENST00000641927 PABPN1LA6NDY0 278 aaKnown RBP17.07■□□□□ 0.32
PHGDH-230ENST00000641927 C8GP07360 202 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 ATP1A2P50993 1020 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 TECRLQ5HYJ1 363 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 ADAMTSL2Q86TH1 951 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 MDM1Q8TC05 714 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 RMDN2Q96LZ7 410 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 C12orf66Q96MD2 445 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 SMOC1Q9H4F8 434 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 IMP3Q9NV31 184 aaKnown RBP17.07■□□□□ 0.32
PHGDH-230ENST00000641927 TAAR2Q9P1P5 351 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 ASF1AQ9Y294 204 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 FANCMQ8IYD8 2048 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 TDRD6O60522 2096 aaKnown RBP17.07■□□□□ 0.32
PHGDH-230ENST00000641927 TP53BP1Q12888 1972 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-230ENST00000641927 PRR19A6NJB7 356 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 DLL1O00548 723 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 AQP9O43315 295 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 PLIN3O60664 434 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 MATN4O95460 622 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 PROCP04070 461 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 MAP4P27816 1152 aaKnown RBP17.07■□□□□ 0.32
PHGDH-230ENST00000641927 MAPK9P45984 424 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 IL9RQ01113 521 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 UAP1L1Q3KQV9 507 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 LAIR1Q6GTX8 287 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 SLC23A3Q6PIS1 610 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 GKN2Q86XP6 184 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 GPSM1Q86YR5 675 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 ZNF548Q8NEK5 533 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-230ENST00000641927 FAM76AQ8TAV0 307 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 ASB11Q8WXH4 323 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 TFGQ92734 400 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-230ENST00000641927 ATOH1Q92858 354 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-230ENST00000641927 GMEB2Q9UKD1 530 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 PCDHGA5Q9Y5G8 931 aa17.07■□□□□ 0.32
PHGDH-230ENST00000641927 KNL1Q8NG31 2342 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 DNAH14Q0VDD8 3507 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 TRBV23OR9-2A0A075B6M9 112 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 NCF1BA6NI72 391 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-230ENST00000641927 OR52A4PA6NMU1 304 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 NCF1CA8MVU1 366 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-230ENST00000641927 SUPT3HB4E1H0 165 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 KERAO60938 352 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 SUPT3HO75486 399 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 PIAS2O75928 621 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 EML2O95834 649 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 CATP04040 527 aaKnown RBP17.06■□□□□ 0.32
PHGDH-230ENST00000641927 NCF1P14598 390 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-230ENST00000641927 CYP2A7P20853 494 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 ACADLP28330 430 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 KRT33BQ14525 404 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 CLCA4Q14CN2 919 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 HLA-BQ31612 363 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 HHATQ5VTY9 493 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 SBSNQ6UWP8 590 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 ARFGAP2Q8N6H7 521 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 PHC3Q8NDX5 983 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 FAM46DQ8NEK8 389 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 RHEBL1Q8TAI7 183 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 NUSAP1Q9BXS6 441 aaKnown RBP17.06■□□□□ 0.32
PHGDH-230ENST00000641927 TRIM54Q9BYV2 358 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 ZDHHC5Q9C0B5 715 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 CAPN10Q9HC96 672 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 MYO15AQ9UKN7 3530 aa17.06■□□□□ 0.32
PHGDH-230ENST00000641927 SYCE1LA8MT33 242 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 GUCA1CO95843 209 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 SYPP08247 313 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 HIST1H2AGP0C0S8 130 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-230ENST00000641927 F3P13726 295 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 CHN1P15882 459 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 HIST1H2ADP20671 130 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 BDKRB1P46663 353 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 KCNC1P48547 511 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 SLC18A1P54219 525 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 SP140Q13342 867 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 PHKG1Q16816 387 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 CAPRIN2Q6IMN6 1127 aaKnown RBP17.05■□□□□ 0.32
PHGDH-230ENST00000641927 DUS1LQ6P1R4 473 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms