RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 CCDC68Q9H2F9 335 aa10.09□□□□□ -0.79
PHGDH-224ENST00000641711 ALG9Q9H6U8 611 aa10.09□□□□□ -0.79
PHGDH-224ENST00000641711 MEAF6Q9HAF1 191 aa10.09□□□□□ -0.79
PHGDH-224ENST00000641711 PKD2L2Q9NZM6 624 aa10.09□□□□□ -0.79
PHGDH-224ENST00000641711 FKBPLQ9UIM3 349 aa10.09□□□□□ -0.79
PHGDH-224ENST00000641711 TMCO1Q9UM00 188 aa10.09□□□□□ -0.79
PHGDH-224ENST00000641711 SLC6A14Q9UN76 642 aa10.09□□□□□ -0.79
PHGDH-224ENST00000641711 ITM2BQ9Y287 266 aa10.09□□□□□ -0.79
PHGDH-224ENST00000641711 ZNF711Q9Y462 761 aa10.09□□□□□ -0.79
PHGDH-224ENST00000641711 A0A088AWK7 358 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 C1orf232A0A0U1RR37 186 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 A0A1W2PR77 199 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 IGLON5A6NGN9 336 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 E9PBE3 544 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 SDHDO14521 159 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 FPGTO14772 594 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 WNT9AO14904 365 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 YKT6O15498 198 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 KLK8O60259 260 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 LZTS3O60299 673 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 CCNT2O60583 730 aaKnown RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 KLHL41O60662 606 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 KERAO60938 352 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 ENTPD5O75356 428 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 CIB2O75838 187 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 SRP72O76094 671 aaKnown RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 RECQL5O94762 991 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 SLC4A1P02730 911 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 ESR1P03372 595 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 SYPP08247 313 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 FGF4P08620 206 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 HOXC4P09017 264 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 MTHFD2P13995 350 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 LHCGRP22888 699 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 PIK3R1P27986 724 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 CD38P28907 300 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 HNF1BP35680 557 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 PPARGP37231 505 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 RABIFP47224 123 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 YPEL5P62699 121 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 CACNG1Q06432 222 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 KPNB1Q14974 876 aaKnown RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 OR4D1Q15615 310 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 KHDC1Q4VXA5 237 aaKnown RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 ACSBG2Q5FVE4 666 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 LRRC66Q68CR7 880 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 PGM2L1Q6PCE3 622 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 CRTC1Q6UUV9 634 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 ARMCX6Q7L4S7 300 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 RAB44Q7Z6P3 723 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 CUZD1Q86UP6 607 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 PIANPQ8IYJ0 282 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 PIP4P2Q8N4L2 257 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 NKAPQ8N5F7 415 aaKnown RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 TP53I13Q8NBR0 393 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 CEP70Q8NHQ1 597 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 STAG3L4Q8TBR4 150 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 PIGKQ92643 395 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 KCNJ9Q92806 393 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 NUS1Q96E22 293 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 MOCOSQ96EN8 888 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 PLEKHG4BQ96PX9 1271 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 SMIM14Q96QK8 99 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 THTPAQ9BU02 230 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 C1QTNF3Q9BXJ4 246 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 NUF2Q9BZD4 464 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 P2RY12Q9H244 342 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 WDR55Q9H6Y2 383 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 ZFYVE1Q9HBF4 777 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 CAPN10Q9HC96 672 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 CYP4F12Q9HCS2 524 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 TM9SF3Q9HD45 589 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 ACSS2Q9NR19 701 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 GPR27Q9NS67 375 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 NKX1-2Q9UD57 310 aaPredicted RBP10.08□□□□□ -0.8
PHGDH-224ENST00000641711 PKP3Q9Y446 797 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 L3MBTL1Q9Y468 752 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 PCDHB1Q9Y5F3 818 aa10.08□□□□□ -0.8
PHGDH-224ENST00000641711 UBA6A0AVT1 1052 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-224ENST00000641711 SYCE1LA8MT33 242 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 H3BMM5 538 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 STX16-NPEPL1H3BU86 382 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 STX16O14662 325 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 KHNYNO15037 678 aaKnown RBP10.07□□□□□ -0.8
PHGDH-224ENST00000641711 SLC31A1O15431 190 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 MMP20O60882 483 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 VPS26AO75436 327 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 ANP32DO95626 131 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 JUNP05412 331 aaKnown RBP10.07□□□□□ -0.8
PHGDH-224ENST00000641711 ALPIP09923 528 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 PRSS56P0CW18 603 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 CTPS1P17812 591 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 ITGAXP20702 1163 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 KELP23276 732 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 RPS3P23396 243 aaKnown RBP eCLIP10.07□□□□□ -0.89e-8■■■■□ 25.4
PHGDH-224ENST00000641711 EPHA3P29320 983 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 MAT2AP31153 395 aaKnown RBP10.07□□□□□ -0.8
PHGDH-224ENST00000641711 FMO4P31512 558 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 PLA2G5P39877 138 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 PFN3P60673 137 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms