RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 A0A1W2PQU0 124 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TCRBV21S2A2A0A5A6 115 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TBC1D3FA6NER0 549 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TRPC5OSA6NMA1 111 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TMEM233B4DJY2 109 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TBC1D3LB9A6J9 549 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 STX16-NPEPL1H3BU86 382 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 STX16O14662 325 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 CASQ2O14958 399 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 FFAR2O15552 330 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 SKAP2O75563 359 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 RPSAP08865 295 aaKnown RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TBC1D3HP0C7X1 549 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 MPC1LP0DKB6 136 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 ENO3P13929 434 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 MTHFD2P13995 350 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 GLULP15104 373 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 ANPEPP15144 967 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 VCLP18206 1134 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 NCF2P19878 526 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 AGTR2P50052 363 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 HK3P52790 923 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 CTSCP53634 463 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 MTTPP55157 894 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 RPS21P63220 83 aaKnown RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 DPTQ07507 201 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 SFSWAPQ12872 951 aaKnown RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 KLF10Q13118 480 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TGFBIQ15582 683 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 MLF2Q15773 248 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 CRY1Q16526 586 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 PLA2G4EQ3MJ16 856 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 LEXMQ3ZCV2 418 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 FBXO43Q4G163 708 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 PLEKHS1Q5SXH7 462 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 C1orf146Q5VVC0 180 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TBC1D3GQ6DHY5 549 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TBC1D3CQ6IPX1 549 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 CRTC3Q6UUV7 619 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 SBSNQ6UWP8 590 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 C16orf89Q6UX73 402 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 HEATR4Q86WZ0 1026 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TBC1D3Q8IZP1 549 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 PLA2G15Q8NCC3 412 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 RP9Q8TA86 221 aaKnown RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TRPC4APQ8TEL6 797 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 ASZ1Q8WWH4 475 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 ESAMQ96AP7 390 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TMEM159Q96B96 161 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 MSANTD3Q96H12 275 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 MAELQ96JY0 434 aaKnown RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 LENG8Q96PV6 779 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 ASB2Q96Q27 587 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TRIM54Q9BYV2 358 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 NUF2Q9BZD4 464 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 OSBPL6Q9BZF3 934 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 COG4Q9H9E3 785 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TRIM39Q9HCM9 518 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 MID1IP1Q9NPA3 183 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 SEMA4BQ9NPR2 832 aaPredicted RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 MRPL40Q9NQ50 206 aaKnown RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TCF7L2Q9NQB0 619 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 WWOXQ9NZC7 414 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 KLHL42Q9P2K6 505 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 EIF2B4Q9UI10 523 aaKnown RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 CNOT6Q9ULM6 557 aaKnown RBP8.68□□□□□ -1.02
PHGDH-219ENST00000641513 CDYLQ9Y232 598 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 OARD1Q9Y530 152 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 ANGPTL3Q9Y5C1 460 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 F5P12259 2224 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 EIF3FO00303 357 aaPredicted RBP8.67□□□□□ -1.02
PHGDH-219ENST00000641513 MAN2B1O00754 1011 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 GRID2O43424 1007 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 PLRG1O43660 514 aaKnown RBP8.67□□□□□ -1.02
PHGDH-219ENST00000641513 PAK4O96013 591 aaPredicted RBP8.67□□□□□ -1.02
PHGDH-219ENST00000641513 SOD1P00441 154 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 C8GP07360 202 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 HIST1H2AGP0C0S8 130 aaPredicted RBP8.67□□□□□ -1.02
PHGDH-219ENST00000641513 COX4I1P13073 169 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 IL9P15248 144 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 HIST1H2ADP20671 130 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 ITGAXP20702 1163 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 CYP2A7P20853 494 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 MAP4P27816 1152 aaKnown RBP8.67□□□□□ -1.02
PHGDH-219ENST00000641513 MAT2AP31153 395 aaKnown RBP8.67□□□□□ -1.02
PHGDH-219ENST00000641513 PREPP48147 710 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 HSPA7P48741 367 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 PRLHRP49683 370 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 ADPRHP54922 357 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 MXRA7P84157 204 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 CREB5Q02930 508 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 CLCQ05315 142 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 ABRQ12979 859 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 UBAP2LQ14157 1087 aaKnown RBP8.67□□□□□ -1.02
PHGDH-219ENST00000641513 IRF4Q15306 451 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 WSCD2Q2TBF2 565 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 C18orf21Q32NC0 220 aaPredicted RBP8.67□□□□□ -1.02
PHGDH-219ENST00000641513 SLC9B1Q4ZJI4 515 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 SZT2Q5T011 3432 aa8.67□□□□□ -1.02
PHGDH-219ENST00000641513 IRAK1BP1Q5VVH5 260 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms