RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 SURF1Q15526 300 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 WSCD2Q2TBF2 565 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 MS4A13Q5J8X5 152 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 MZT2BQ6NZ67 158 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 KLHL35Q6PF15 583 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 LINC00696Q6ZRV3 163 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 MAEAQ7L5Y9 396 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 Q8N3U1 123 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 CARNMT1Q8N4J0 409 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 MDS2Q8NDY4 140 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 ZMIZ2Q8NF64 920 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 ERMNQ8TAM6 284 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 MAML1Q92585 1016 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 UBE2FQ969M7 185 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 FUBP1Q96AE4 644 aaKnown RBP3.33□□□□□ -1.88
CCDC7-213ENST00000639290 ISG20Q96AZ6 181 aaKnown RBP3.33□□□□□ -1.88
CCDC7-213ENST00000639290 SUCNR1Q9BXA5 334 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 AP1M1Q9BXS5 423 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 FRMD8Q9BZ67 464 aaPredicted RBP3.33□□□□□ -1.88
CCDC7-213ENST00000639290 UBTD1Q9HAC8 227 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 BRD7Q9NPI1 651 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.33□□□□□ -1.88
CCDC7-213ENST00000639290 PCDHA4Q9UN74 947 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 TAF6LQ9Y6J9 622 aa3.33□□□□□ -1.88
CCDC7-213ENST00000639290 hCG_1642624A0A1W2PR95 340 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 SH3D21A4FU49 640 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 DDX3YO15523 660 aaKnown RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 SLC37A4O43826 429 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 UBXN7O94888 489 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 IL33O95760 270 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 ESR1P03372 595 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 PIM1P11309 404 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 SRCP12931 536 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 GABRA1P14867 456 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 RHCEP18577 417 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 FMO4P31512 558 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 CDKN1AP38936 164 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 PGFP49763 221 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 IL2P60568 153 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 LGALS3BPQ08380 585 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 POSTNQ15063 836 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 ACCSLQ4AC99 568 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 VASNQ6EMK4 673 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 SLC30A9Q6PML9 568 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 PAQR9Q6ZVX9 377 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 CREBRFQ8IUR6 639 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 SFTPA2Q8IWL1 248 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 TMEM130Q8N3G9 435 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 SYT2Q8N9I0 419 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 MUC7Q8TAX7 377 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 DENND1AQ8TEH3 1009 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 CCT6BQ92526 530 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 TRIM63Q969Q1 353 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 FAXDC2Q96IV6 333 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 CELF6Q96J87 481 aaKnown RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 ELMO2Q96JJ3 720 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 COL21A1Q96P44 957 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 QRFPRQ96P65 431 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 KCNK16Q96T55 309 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 MED10Q9BTT4 135 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 SLC26A1Q9H2B4 701 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 CATSPERBQ9H7T0 1116 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 ACTR5Q9H9F9 607 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 KRT82Q9NSB4 513 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 OGFRQ9NZT2 677 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 KCND2Q9NZV8 630 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 JKAMPQ9P055 326 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 REV1Q9UBZ9 1251 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 NDRG3Q9UGV2 375 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 MRFAP1Q9Y605 127 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 AP1M2Q9Y6Q5 423 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 HRNRQ86YZ3 2850 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 TENM2Q9NT68 2774 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 TCRBV16S1A1N1A0A5B0 115 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 MBD3L3A6NE82 208 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 J3KRW8 73 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 KIAA0513O60268 411 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 ZNF354AO60765 605 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 LEFTY1O75610 366 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 JTBO76095 146 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 B3GALT4O96024 378 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 KRT1P04264 644 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 FAM200BP0CF97 657 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 FAM157BP0CG42 384 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 ZNF24P17028 368 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 TFEBP19484 476 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 CRYGSP22914 178 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 RPA1P27694 616 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 EEF1DP29692 281 aaKnown RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 CARSP49589 748 aaKnown RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 UBE2IP63279 158 aaKnown RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 CTBSQ01459 385 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 BTKQ06187 659 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 PAK1Q13153 545 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 ATP13A4Q4VNC1 1196 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 HIBCHQ6NVY1 386 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-213ENST00000639290 RAD9BQ6WBX8 426 aa3.32□□□□□ -1.88
CCDC7-213ENST00000639290 SATL1Q86VE3 508 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms