RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ASIC3Q9UHC3 531 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 DRG1Q9Y295 367 aaKnown RBP7.66□□□□□ -1.18
PNKP-229ENST00000637897 SNX24Q9Y343 169 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 OR51F1A6NGY5 319 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 STX7O15400 261 aaKnown RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 HCRTR1O43613 425 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 LIASO43766 372 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 VIPP01282 170 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 ITGB2P05107 769 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 MTHFD1P11586 935 aaKnown RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 FGF5P12034 268 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 NELFEP18615 380 aaKnown RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 IDSP22304 550 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 PDHA2P29803 388 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 PBLDP30039 288 aaPredicted RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 HSD17B3P37058 310 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 KCNJ1P48048 391 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 PRLHRP49683 370 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 PLTPP55058 493 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 EIF3BP55884 814 aaKnown RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 DHX9Q08211 1270 aaKnown RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 BIRC2Q13490 618 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 SNX1Q13596 522 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 SEMA3AQ14563 771 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 TERF2Q15554 542 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 ZNF789Q5FWF6 425 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 LDLRAP1Q5SW96 308 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 FNBP1LQ5T0N5 605 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 DCAF12Q5T6F0 453 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 LCN10Q6JVE6 187 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 DARS2Q6PI48 645 aaKnown RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 ZDHHC24Q6UX98 284 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 CROCCP2Q86T23 111 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 ZNF605Q86T29 641 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 AMZ2Q86W34 360 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 TAB3Q8N5C8 712 aaPredicted RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 SLC38A9Q8NBW4 561 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 OR2L2Q8NH16 312 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 UBLCP1Q8WVY7 318 aaPredicted RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 SH3KBP1Q96B97 665 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 SLC45A3Q96JT2 553 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 ZNF778Q96MU6 729 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 ZIM3Q96PE6 472 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 OR6C1Q96RD1 312 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 SRPK1Q96SB4 655 aaKnown RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 TBL1YQ9BQ87 522 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 TMEM121Q9BTD3 319 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 TXLNGYQ9BZA5 131 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 OR52A5Q9H2C5 316 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 ASB8Q9H765 288 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 WDR70Q9NW82 654 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.65□□□□□ -1.18
PNKP-229ENST00000637897 PLAAQ9Y263 795 aa7.65□□□□□ -1.18
PNKP-229ENST00000637897 DNMT3AQ9Y6K1 912 aaPredicted RBP7.65□□□□□ -1.18
PNKP-229ENST00000637897 MGAT4DA6NG13 374 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 MROH6A6NGR9 719 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 EIF4E1BA6NMX2 242 aaKnown RBP7.64□□□□□ -1.19
PNKP-229ENST00000637897 H7C0S8 307 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 BTN3A3O00478 584 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 SPAG6O75602 509 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 ANXA9O76027 345 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 CTSBP07858 339 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 EBLN1P0CF75 366 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 SLC2A4P14672 509 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 AMD1P17707 334 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 FOXN2P32314 431 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 STAT5AP42229 794 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 ARCN1P48444 511 aaKnown RBP7.64□□□□□ -1.19
PNKP-229ENST00000637897 KPNA2P52292 529 aaKnown RBP7.64□□□□□ -1.19
PNKP-229ENST00000637897 PMS2P54278 862 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 RAB15P59190 212 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 NFATC3Q12968 1075 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 DBN1Q16643 649 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 PARP6Q2NL67 630 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 TUBB8Q3ZCM7 444 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 COLEC12Q5KU26 742 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 TMEM164Q5U3C3 297 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 CACHD1Q5VU97 1274 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 ZDHHC20Q5W0Z9 365 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 PWWP2BQ6NUJ5 590 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 NAPRTQ6XQN6 538 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 ZNF534Q76KX8 674 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 TRMT10CQ7L0Y3 403 aaKnown RBP7.64□□□□□ -1.19
PNKP-229ENST00000637897 GSTA5Q7RTV2 222 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 PLXDC1Q8IUK5 500 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 CDKL3Q8IVW4 592 aaPredicted RBP7.64□□□□□ -1.19
PNKP-229ENST00000637897 NLGN4XQ8N0W4 816 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 NXPE1Q8N323 547 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 CLDN19Q8N6F1 224 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 GALNT6Q8NCL4 622 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 NLGN4YQ8NFZ3 816 aaPredicted RBP7.64□□□□□ -1.19
PNKP-229ENST00000637897 OR13J1Q8NGT2 312 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 FLVCR1-AS1Q8TAF5 88 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 FAM76AQ8TAV0 307 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 GDAP1Q8TB36 358 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 FBXO25Q8TCJ0 367 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 LKAAEAR1Q8TD35 194 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 CDKN2AIPNLQ96HQ2 116 aa7.64□□□□□ -1.19
PNKP-229ENST00000637897 ELMO2Q96JJ3 720 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms