RNA–Protein interactions for RNA: ENST00000637699.1

CLN3-262, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,228 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-262ENST00000637699 BCL7AQ4VC05 210 aa18.82■□□□□ 0.6
CLN3-262ENST00000637699 VWA5B1Q5TIE3 1220 aa18.82■□□□□ 0.6
CLN3-262ENST00000637699 OR4K2Q8NGD2 314 aa18.82■□□□□ 0.6
CLN3-262ENST00000637699 DCUN1D1Q96GG9 259 aa18.82■□□□□ 0.6
CLN3-262ENST00000637699 LINC00615Q96LM1 132 aaPredicted RBP18.82■□□□□ 0.6
CLN3-262ENST00000637699 CCM2Q9BSQ5 444 aa18.82■□□□□ 0.6
CLN3-262ENST00000637699 FSD1LQ9BXM9 530 aa18.82■□□□□ 0.6
CLN3-262ENST00000637699 C5AR2Q9P296 337 aa18.82■□□□□ 0.6
CLN3-262ENST00000637699 FKBPLQ9UIM3 349 aa18.82■□□□□ 0.6
CLN3-262ENST00000637699 PADI2Q9Y2J8 665 aa18.82■□□□□ 0.6
CLN3-262ENST00000637699 CCDC66A2RUB6 948 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 BTN3A1O00481 513 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 LDB2O43679 373 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 AKR1B10O60218 316 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 SRP72O76094 671 aaKnown RBP18.81■□□□□ 0.6
CLN3-262ENST00000637699 PYGMP11217 842 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 MLIPQ5VWP3 458 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 PHC3Q8NDX5 983 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 P3H4Q92791 437 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 HAUS1Q96CS2 278 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 C5orf34Q96MH7 638 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 TRAPPC9Q96Q05 1148 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 DPH2Q9BQC3 489 aaPredicted RBP18.81■□□□□ 0.6
CLN3-262ENST00000637699 FICDQ9BVA6 458 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 RSPH14Q9UHP6 348 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 SLC5A6Q9Y289 635 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 B3GNT3Q9Y2A9 372 aa18.81■□□□□ 0.6
CLN3-262ENST00000637699 ANKUB1A6NFN9 424 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 C2orf81A6NN90 581 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 KLF7O75840 302 aaPredicted RBP18.8■□□□□ 0.6
CLN3-262ENST00000637699 MSL3P1P0C860 447 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 CDHR3Q6ZTQ4 885 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 MRGPREQ86SM8 312 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 RHOT2Q8IXI1 618 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 HM13Q8TCT9 377 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 RBM41Q96IZ5 413 aaKnown RBP18.8■□□□□ 0.6
CLN3-262ENST00000637699 RANBP9Q96S59 729 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 VAT1Q99536 393 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 PITPNM3Q9BZ71 974 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 ILKAPQ9H0C8 392 aaPredicted RBP18.8■□□□□ 0.6
CLN3-262ENST00000637699 FAM96AQ9H5X1 160 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 SPTLC3Q9NUV7 552 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 CRLS1Q9UJA2 301 aa18.8■□□□□ 0.6
CLN3-262ENST00000637699 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLN3-262ENST00000637699 SPOPO43791 374 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 HBQ1P09105 142 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 CBSLP0DN79 551 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 RALBP11234 206 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 PTMSP20962 102 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 COMTP21964 271 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 CBSP35520 551 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 SLC1A1P43005 524 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 ELOAQ14241 798 aaKnown RBP18.79■□□□□ 0.6
CLN3-262ENST00000637699 TAF1AQ15573 450 aaPredicted RBP18.79■□□□□ 0.6
CLN3-262ENST00000637699 TAZQ16635 292 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 ZRANB3Q5FWF4 1079 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 C1orf189Q5VU69 101 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 LYPLAL1Q5VWZ2 237 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 ZNF385CQ66K41 422 aaPredicted RBP18.79■□□□□ 0.6
CLN3-262ENST00000637699 SPOCD1Q6ZMY3 1216 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 GPR135Q8IZ08 494 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 CLEC1AQ8NC01 280 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 OR8K1Q8NGG5 319 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 OR52E1Q8NGJ3 308 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 N4BP2L2Q92802 583 aaPredicted RBP18.79■□□□□ 0.6
CLN3-262ENST00000637699 FER1L6-AS2Q96M78 137 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 APOL2Q9BQE5 337 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 DHRS4Q9BTZ2 278 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 XKR8Q9H6D3 395 aa18.79■□□□□ 0.6
CLN3-262ENST00000637699 PTRH2Q9Y3E5 179 aaKnown RBP18.79■□□□□ 0.6
CLN3-262ENST00000637699 COPG1Q9Y678 874 aaKnown RBP18.79■□□□□ 0.6
CLN3-262ENST00000637699 CCDC88CQ9P219 2028 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 C2orf74A8MZ97 194 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 GOLGA6L19H0YKK7 550 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 MASP2O00187 686 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 IFRD1O00458 451 aaPredicted RBP18.78■□□□□ 0.6
CLN3-262ENST00000637699 PEX12O00623 359 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 ALPPP05187 535 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 HADHAP40939 763 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 PRLHRP49683 370 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 TMPRSS15P98073 1019 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 XIAPP98170 497 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 PRKG2Q13237 762 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 OLIG2Q13516 323 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 SSPNQ14714 243 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 MYBPC3Q14896 1274 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 DCAF10Q5QP82 559 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 AMIGO1Q86WK6 493 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 GALNT16Q8N428 558 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 IP6K3Q96PC2 410 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 TFB2MQ9H5Q4 396 aaKnown RBP18.78■□□□□ 0.6
CLN3-262ENST00000637699 C10orf88Q9H8K7 445 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 ACTR10Q9NZ32 417 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 GPN3Q9UHW5 284 aaPredicted RBP18.78■□□□□ 0.6
CLN3-262ENST00000637699 TRHDEQ9UKU6 1024 aa18.78■□□□□ 0.6
CLN3-262ENST00000637699 C5orf60A6NFR6 353 aa18.77■□□□□ 0.6
CLN3-262ENST00000637699 ATP1B2P14415 290 aaPredicted RBP18.77■□□□□ 0.6
CLN3-262ENST00000637699 PDHA2P29803 388 aa18.77■□□□□ 0.6
CLN3-262ENST00000637699 FOLR3P41439 243 aa18.77■□□□□ 0.6
CLN3-262ENST00000637699 GLRBP48167 497 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms