RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 RCSD1Q6JBY9 416 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 RINT1Q6NUQ1 792 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 CDC73Q6P1J9 531 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 FAM171BQ6P995 826 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 FRA10AC1Q70Z53 315 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 UTS2BQ765I0 119 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 BZW1Q7L1Q6 419 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 PARS2Q7L3T8 475 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 COPS6Q7L5N1 327 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 PTF1AQ7RTS3 328 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 KRT27Q7Z3Y8 459 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 TRMT11Q7Z4G4 463 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 ADAMTSL2Q86TH1 951 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 IQCHQ86VS3 1027 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 CDR2LQ86X02 465 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 PPP1R3BQ86XI6 285 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 CPNE8Q86YQ8 564 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 TICAM1Q8IUC6 712 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 PHYKPLQ8IUZ5 450 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 MISPQ8IVT2 679 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 TBC1D19Q8N5T2 526 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ARFGAP1Q8N6T3 406 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ANKRD44Q8N8A2 993 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SNX31Q8N9S9 440 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 FSIP1Q8NA03 581 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 MINDY2Q8NBR6 621 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 UXS1Q8NBZ7 420 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 OR10T2Q8NGX3 314 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 OR56A3Q8NH54 315 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 NDNFQ8TB73 568 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 FANK1Q8TC84 345 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 TAS1R2Q8TE23 839 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 PSPC1Q8WXF1 523 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 SNX19Q92543 992 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 COPS5Q92905 334 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 DAZAP1Q96EP5 407 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 DTD2Q96FN9 168 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 CLPTM1LQ96KA5 538 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 C16orf92Q96LL3 132 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 PPP1R36Q96LQ0 422 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ZNF558Q96NG5 402 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 LRFN5Q96NI6 719 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ZNF317Q96PQ6 595 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 KLHL5Q96PQ7 755 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 MMS19Q96T76 1030 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 VRK1Q99986 396 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 POTEKPQ9BYX7 375 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 FRMD8Q9BZ67 464 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 MFFQ9GZY8 342 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 DRC3Q9H069 523 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 TMEM168Q9H0V1 697 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 OR51V1Q9H2C8 321 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 NELFAQ9H3P2 528 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 CUEDC2Q9H467 287 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 POFUT1Q9H488 388 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 RGCCQ9H4X1 137 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 AUNIPQ9H7T9 357 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 MMP25Q9NPA2 562 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 NT5MQ9NPB1 228 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 PPANQ9NQ55 473 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 ZNF275Q9NSD4 429 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 PNPLA3Q9NST1 481 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 MAN2C1Q9NTJ4 1040 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 TDP1Q9NUW8 608 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 NKIRAS1Q9NYS0 192 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ERAP1Q9NZ08 941 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SPG21Q9NZD8 308 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.96□□□□□ -1.94
VIM-210ENST00000637053 CRNNQ9UBG3 495 aaPredicted RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 MGAT4CQ9UBM8 478 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 TRIM10Q9UDY6 481 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 FBXL17Q9UF56 701 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 KCNN3Q9UGI6 736 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 ENPP5Q9UJA9 477 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 DBNLQ9UJU6 430 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 USP18Q9UMW8 372 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 KCNK6Q9Y257 313 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 PADI2Q9Y2J8 665 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 GDAQ9Y2T3 454 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 SAMHD1Q9Y3Z3 626 aaKnown RBP2.96□□□□□ -1.94
VIM-210ENST00000637053 LRRC42Q9Y546 428 aa2.96□□□□□ -1.94
VIM-210ENST00000637053 PUS1Q9Y606 427 aaKnown RBP eCLIP2.96□□□□□ -1.94
VIM-210ENST00000637053 FHAD1B1AJZ9 1412 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 LOC102723996A0A087X1L8 192 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 A0A0U1RQJ8 604 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 A0A1W2PQF6 199 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 A0A1W2PQM1 296 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 TYW5A2RUC4 315 aaKnown RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 MBD3L4A6NDZ8 208 aaPredicted RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 MBD3L3A6NE82 208 aaPredicted RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 GAGE10A6NGK3 116 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 ARGFXA6NJG6 315 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 A6NL46 340 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 OR2AG2A6NM03 316 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 TRPC5OSA6NMA1 111 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 C4orf47A7E2U8 309 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 ZNF839A8K0R7 811 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 TMEM233B4DJY2 109 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 TCP11X1B4DZS4 312 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 C22orf46C9J442 243 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms