RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CPNE7Q9UBL6 633 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 SLC24A2Q9UI40 661 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 HEBP2Q9Y5Z4 205 aa15.63■□□□□ 0.09
CLN6-216ENST00000636876 CFAP20Q9Y6A4 193 aaKnown RBP15.63■□□□□ 0.09
CLN6-216ENST00000636876 ASXL3Q9C0F0 2248 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 HMX2A2RU54 273 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 EIF3FO00303 357 aaPredicted RBP15.62■□□□□ 0.09
CLN6-216ENST00000636876 NUDT17P0C025 328 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 CBSLP0DN79 551 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 ENO3P13929 434 aaPredicted RBP15.62■□□□□ 0.09
CLN6-216ENST00000636876 CKMT2P17540 419 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 CSRP1P21291 193 aaKnown RBP15.62■□□□□ 0.09
CLN6-216ENST00000636876 CNTFP26441 200 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 CBSP35520 551 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 FASLGP48023 281 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 PGGT1BP53609 377 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 HHEXQ03014 270 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 BMPR2Q13873 1038 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.62■□□□□ 0.09
CLN6-216ENST00000636876 MROH9Q5TGP6 573 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 DUS1LQ6P1R4 473 aaKnown RBP15.62■□□□□ 0.09
CLN6-216ENST00000636876 GUSBP11Q6P575 273 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 ADGRD1Q6QNK2 874 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 NEK10Q6ZWH5 1172 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 CEP97Q8IW35 865 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 OR6C4Q8NGE1 309 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 TFGQ92734 400 aaPredicted RBP15.62■□□□□ 0.09
CLN6-216ENST00000636876 SLC32A1Q9H598 525 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 CAB39LQ9H9S4 337 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 PPCSQ9HAB8 311 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 POT1Q9NUX5 634 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 RNF215Q9Y6U7 377 aa15.62■□□□□ 0.09
CLN6-216ENST00000636876 CPED1A4D0V7 1026 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 EME2A4GXA9 379 aaPredicted RBP15.61■□□□□ 0.09
CLN6-216ENST00000636876 TNFSF14O43557 240 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 NUDT21O43809 227 aaKnown RBP15.61■□□□□ 0.09
CLN6-216ENST00000636876 TCEA3O75764 348 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 KRT38O76015 456 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 VIPP01282 170 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 MPC1LP0DKB6 136 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 GLB1P16278 677 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 STMN1P16949 149 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 SDHBP21912 280 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 RGS4P49798 205 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 ABRQ12979 859 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 BIRC2Q13490 618 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 ZNF460Q14592 562 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 ZKSCAN8Q15776 578 aaPredicted RBP15.61■□□□□ 0.09
CLN6-216ENST00000636876 ZNF438Q7Z4V0 828 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 GLRX5Q86SX6 157 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 SKA2Q8WVK7 121 aaPredicted RBP15.61■□□□□ 0.09
CLN6-216ENST00000636876 HNRNPLLQ8WVV9 542 aaKnown RBP15.61■□□□□ 0.09
CLN6-216ENST00000636876 NAT6Q93015 286 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 STN1Q9H668 368 aaKnown RBP15.61■□□□□ 0.09
CLN6-216ENST00000636876 LRIT1Q9P2V4 623 aa15.61■□□□□ 0.09
CLN6-216ENST00000636876 PSMC3IPQ9P2W1 217 aaPredicted RBP15.61■□□□□ 0.09
CLN6-216ENST00000636876 TSR3Q9UJK0 312 aaKnown RBP15.61■□□□□ 0.09
CLN6-216ENST00000636876 RP1P56715 2156 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 PRAMEF33A0A0G2JMD5 474 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 RHPN2P1A8MT19 583 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 PPM1DO15297 605 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 PHGDHO43175 533 aaKnown RBP15.6■□□□□ 0.09
CLN6-216ENST00000636876 KRT37O76014 449 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 TSPAN12O95859 305 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 SNRPAP09012 282 aaKnown RBP15.6■□□□□ 0.09
CLN6-216ENST00000636876 ZNF37AP17032 561 aaPredicted RBP15.6■□□□□ 0.09
CLN6-216ENST00000636876 ACP1P24666 158 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 NDUFS1P28331 727 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 SERPINB8P50452 374 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 IL2P60568 153 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 RAB10P61026 200 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 DNAJC3Q13217 504 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 TRIP6Q15654 476 aaKnown RBP15.6■□□□□ 0.09
CLN6-216ENST00000636876 BEND6Q5SZJ8 279 aaPredicted RBP15.6■□□□□ 0.09
CLN6-216ENST00000636876 LRRC8EQ6NSJ5 796 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 TMEM207Q6UWW9 146 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 UNC5DQ6UXZ4 953 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 CYHR1Q6ZMK1 362 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 EFL1Q7Z2Z2 1120 aaKnown RBP15.6■□□□□ 0.09
CLN6-216ENST00000636876 PIWIL4Q7Z3Z4 852 aaKnown RBP15.6■□□□□ 0.09
CLN6-216ENST00000636876 CMC1Q7Z7K0 106 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 TDRPQ86YL5 185 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 RBM12BQ8IXT5 1001 aaKnown RBP15.6■□□□□ 0.09
CLN6-216ENST00000636876 NKAPQ8N5F7 415 aaKnown RBP15.6■□□□□ 0.09
CLN6-216ENST00000636876 PHC3Q8NDX5 983 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 OR2W6PQ8NHA6 318 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 EEF1AKMT1Q8WVE0 214 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 CCDC74AQ96AQ1 378 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 SH3KBP1Q96B97 665 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 LINGO1Q96FE5 620 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 FERD3LQ96RJ6 166 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 RTKNQ9BST9 563 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 MVB12BQ9H7P6 319 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 UCK1Q9HA47 277 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 GPAMQ9HCL2 828 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 SLC40A1Q9NP59 571 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 RUVBL2Q9Y230 463 aaKnown RBP15.6■□□□□ 0.09
CLN6-216ENST00000636876 PLAAQ9Y263 795 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 ASF1AQ9Y294 204 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 NFS1Q9Y697 457 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms