RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 A0A1W2PPM1 405 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 SDC3O75056 442 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 RPP40O75818 363 aaKnown RBP17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 BDKRB1P46663 353 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 ZNF135P52742 658 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 CDH11P55287 796 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 FBXW8Q8N3Y1 598 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 RIOX1Q9H6W3 641 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 H0YGN5 161 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 NARSO43776 548 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 RENP00797 406 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 ERICH5Q6P6B1 374 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 ZPBP2Q6X784 338 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 DMRTB1Q96MA1 342 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 IPPKQ9H8X2 491 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 TVP23BQ9NYZ1 205 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 PCDHA2Q9Y5H9 948 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 NCOA3Q9Y6Q9 1424 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 MFSD11O43934 449 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 OR3A3P47888 321 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 OR3A2P47893 321 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 LIPMQ5VYY2 423 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 EBF3Q9H4W6 596 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 hCG_1807616A0A1W2PRN6 198 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 CHADO15335 359 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 LIASO43766 372 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 MAFO75444 373 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 KLK3P07288 261 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 CCL5P13501 91 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 FAUP35544 74 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 MAP3K8P41279 467 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 POLR2JP52435 117 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 LPCAT4Q643R3 524 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 SLC25A25Q6KCM7 469 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 TPPPO94811 219 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 LRIG2O94898 1065 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 GAD2Q05329 585 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 CUZD1Q86UP6 607 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 ZNF567Q8N184 647 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 TEFMQ96QE5 360 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 ANKHQ9HCJ1 492 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 PRDM8Q9NQV8 689 aa17.58■□□□□ 0.4
CACNA1A-227ENST00000636549 BLOC1S5-TXNDC5H3BN57 136 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 LHCGRP22888 699 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 CHIT1Q13231 466 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 PLGLAQ15195 96 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 AHSA2Q719I0 299 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 MAP4K3Q8IVH8 894 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 FAM83DQ9H4H8 585 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 TCF7L1Q9HCS4 588 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 FBXL12Q9NXK8 326 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 VSTM5A8MXK1 200 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 NPIPA5E9PKD4 350 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 DDR1Q08345 913 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 OCLNQ16625 522 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 OR5T1Q8NG75 326 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 ADAD1Q96M93 576 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 EIF2B4Q9UI10 523 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 ZNF639Q9UID6 485 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 NPIPA1Q9UND3 350 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 PLAGL2Q9UPG8 496 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 KCNK6Q9Y257 313 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 RGS10O43665 173 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 AHCYL1O43865 530 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 WFS1O76024 890 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 CLDN9O95484 217 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 FABP3P05413 133 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 MAGEA12P43365 314 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 GRIK2Q13002 908 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 CHRAC1Q9NRG0 131 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 VWA7Q9Y334 891 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 TNS2Q63HR2 1409 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 MMP20O60882 483 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 CASP6P55212 293 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 DHDDSQ86SQ9 333 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 ZCCHC9Q8N567 271 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 EIF2B3Q9NR50 452 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 BATF3Q9NR55 127 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 GKN1Q9NS71 199 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 CPS1P31327 1500 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 C11orf98E9PRG8 122 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 HSD17B2P37059 387 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 C6orf52Q5T4I8 152 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 VSIG10LQ86VR7 867 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 PSMG2Q969U7 264 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 WNT6Q9Y6F9 365 aa17.57■□□□□ 0.4
CACNA1A-227ENST00000636549 OTX2P32243 289 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 MPP2Q14168 576 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 TIMM50Q3ZCQ8 353 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 ZNF648Q5T619 568 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 SLCO6A1Q86UG4 719 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 RANBP3LQ86VV4 465 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 MON1AQ86VX9 555 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 PIGXQ8TBF5 258 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 P2RY11Q96G91 374 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 DIRAS2Q96HU8 199 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 VAT1Q99536 393 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms