RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FAM230AA0A1W2PPH8 454 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 A0A1W2PQJ5 194 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 AGAP5A6NIR3 686 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SEC14L6B5MCN3 397 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 EI24O14681 340 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 ANKRD28O15084 1053 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 BRINP1O60477 761 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 AP2A2O94973 939 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 MYBP10242 640 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 IL7RP16871 459 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CTPS1P17812 591 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 HSD11B2P80365 405 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 NIPAL4Q0D2K0 466 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 HAGHLQ6PII5 290 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 MPZL3Q6UWV2 235 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF410Q86VK4 478 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 ATAD1Q8NBU5 361 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 SMPDL3BQ92485 455 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 VCPIP1Q96JH7 1222 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 PAFAH2Q99487 392 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 VRK1Q99986 396 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 GPATCH1Q9BRR8 931 aaKnown RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 POMKQ9H5K3 350 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TDRD3Q9H7E2 651 aaKnown RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 KCNK4Q9NYG8 393 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 KCNIP1Q9NZI2 227 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF69Q9UC07 566 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TRAF6Q9Y4K3 522 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CPS1P31327 1500 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 FAM221BA6H8Z2 402 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PP2D1A8MPX8 630 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SCAMP1O15126 338 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 HCRTR2O43614 444 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SLC15A1P46059 708 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ACVR2BQ13705 512 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ENPP2Q13822 863 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 TPRG1LQ5T0D9 272 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 LANCL3Q6ZV70 420 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 KIAA0907Q7Z7F0 614 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ADGRD2Q7Z7M1 963 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 GPR180Q86V85 440 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CADM2Q8N3J6 435 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 NAXEQ8NCW5 288 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 BHLHE22Q8NFJ8 381 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SULT4A1Q9BR01 284 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CLK4Q9HAZ1 481 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 GOLGA2P5Q9HBQ8 144 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 HMX1Q9NP08 348 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 MANSC4A6NHS7 340 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 TLL1O43897 1013 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 TPPPO94811 219 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 TRBC1P01850 177 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 FAM228BP0C875 321 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 UGT2B10P36537 528 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 HTR3AP46098 478 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 KHKP50053 298 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 LSM3P62310 102 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 FGL1Q08830 312 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 COL28A1Q2UY09 1125 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PKDCCQ504Y2 493 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 C11orf63Q6NUN7 778 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 DPY19L4Q7Z388 723 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 TMEM156Q8N614 296 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 OR2W6PQ8NHA6 318 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 MFSD14AQ96MC6 490 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF558Q96NG5 402 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PDCD1LG2Q9BQ51 273 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 NXF3Q9H4D5 531 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SEC14L4Q9UDX3 406 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 GPR160Q9UJ42 338 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ARPC4-TTLL3A0A0A6YYG9 625 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 E7EQ34 232 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 H7C1Q1 480 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 AKAP3O75969 853 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ITPKAP23677 461 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PAX6P26367 422 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 UQCRFS1P47985 274 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 MAP2K5Q13163 448 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 HSD17B12Q53GQ0 312 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 C6orf141Q5SZD1 244 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CYP2U1Q7Z449 544 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF283Q8N7M2 679 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CERS2Q96G23 380 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 RIPOR3Q96MK2 946 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 OR14A2Q96R54 314 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CDRT15Q96T59 188 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CMKLR1Q99788 373 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 BTBD10Q9BSF8 475 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 MCMBPQ9BTE3 642 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CHIAQ9BZP6 476 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ZFP57Q9NU63 452 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 KLK14Q9P0G3 267 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 MAGEL2Q9UJ55 1249 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 INO80Q9ULG1 1556 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 TEX13DA0A0J9YY54 714 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ELOA3DA6NLF2 546 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 DISC1C4P0D8 188 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 J3QR89 54 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 AIREO43918 545 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms