RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 NCSTNQ92542 709 aa14.38□□□□□ -0.11
CDC42BPB-209ENST00000634889 FERD3LQ96RJ6 166 aa14.38□□□□□ -0.11
CDC42BPB-209ENST00000634889 RAB33BQ9H082 229 aa14.38□□□□□ -0.11
CDC42BPB-209ENST00000634889 SEMA6CQ9H3T2 930 aa14.38□□□□□ -0.11
CDC42BPB-209ENST00000634889 ZDHHC18Q9NUE0 388 aa14.38□□□□□ -0.11
CDC42BPB-209ENST00000634889 MOCS1Q9NZB8 636 aa14.38□□□□□ -0.11
CDC42BPB-209ENST00000634889 OGFRQ9NZT2 677 aa14.38□□□□□ -0.11
CDC42BPB-209ENST00000634889 PDP2Q9P2J9 529 aa14.38□□□□□ -0.11
CDC42BPB-209ENST00000634889 KLHL42Q9P2K6 505 aa14.38□□□□□ -0.11
CDC42BPB-209ENST00000634889 IGHV5-10-1A0A0J9YXX1 117 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 TMEM8BA6NDV4 472 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 TRABD2BA6NFA1 517 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 HGSO14964 777 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 NIPSNAP2O75323 286 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 HAUS5O94927 633 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 RPN2P04844 631 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 THRAP10827 490 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 HOXB3P14651 431 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 CHRM3P20309 590 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 CARSP49589 748 aaKnown RBP14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 MPP1Q00013 466 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 GBX1Q14549 363 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 PHF19Q5T6S3 580 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 ZNF549Q6P9A3 640 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 TRMT10BQ6PF06 316 aaKnown RBP14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 UNC5DQ6UXZ4 953 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 CEP128Q6ZU80 1094 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 CYS1Q717R9 158 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 VRK3Q8IV63 474 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 PALM2Q8IXS6 379 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 TBC1D21Q8IYX1 336 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 OR5K2Q8NHB8 316 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 WDR36Q8NI36 951 aaKnown RBP14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 CCDC74BQ96LY2 380 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 CMKLR1Q99788 373 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 TSPYL1Q9H0U9 437 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 TRIT1Q9H3H1 467 aaKnown RBP14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 TFB2MQ9H5Q4 396 aaKnown RBP14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 L2HGDHQ9H9P8 463 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 POLR1BQ9H9Y6 1135 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 NSMCE4AQ9NXX6 385 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 ZFATQ9P243 1243 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 DKK4Q9UBT3 224 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 EPHA6Q9UF33 1036 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 POLG2Q9UHN1 485 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 DMGDHQ9UI17 866 aaKnown RBP14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 CORO1CQ9ULV4 474 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 ASF1AQ9Y294 204 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 PCDHGA8Q9Y5G5 932 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 FRYQ5TBA9 3013 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 FREM2Q5SZK8 3169 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 UNC13CQ8NB66 2214 aa14.37□□□□□ -0.11
CDC42BPB-209ENST00000634889 TOX3O15405 576 aaPredicted RBP14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 KDM1AO60341 852 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 C9P02748 559 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 TYRP1P17643 537 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 MLLT3P42568 568 aaPredicted RBP14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 LSSP48449 732 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 CLCN7P51798 805 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 CSE1LP55060 971 aaKnown RBP14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 ILF2Q12905 390 aaKnown RBP14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 TTLL9Q3SXZ7 439 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 CNSTQ6PJW8 725 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 IGF2-ASQ6U949 168 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 RAB11FIP2Q7L804 512 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 SLC26A11Q86WA9 606 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 CCDC25Q86WR0 208 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 OOSP2Q86WS3 158 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 LSMEM2Q8N112 164 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 ZBTB2Q8N680 514 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 PHC3Q8NDX5 983 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 AARSD1Q9BTE6 412 aaKnown RBP14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 AKAP7Q9P0M2 348 aaPredicted RBP14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 TMEM9Q9P0T7 183 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 MTRF1LQ9UGC7 380 aaKnown RBP14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 SATB2Q9UPW6 733 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 MED16Q9Y2X0 877 aa14.36□□□□□ -0.11
CDC42BPB-209ENST00000634889 C1QTNF9BB2RNN3 333 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 MATN2O00339 956 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 PLD2O14939 933 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 VPS26AO75436 327 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 SPAG6O75602 509 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 DXOO77932 396 aaKnown RBP14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 AHSGP02765 367 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 ANKRD34CP0C6C1 535 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 C1QTNF9P0C862 333 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 GABRB3P28472 473 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 SSTR1P30872 391 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 MAGEA4P43358 317 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 GABREP78334 506 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 C3orf38Q5JPI3 329 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 UGT3A1Q6NUS8 523 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 RELL1Q8IUW5 271 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 OR52E1Q8NGJ3 308 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 OR5AR1Q8NGP9 310 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 LCN9Q8WX39 176 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 RSC1A1Q92681 617 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 CDKL2Q92772 493 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 ZDHHC12Q96GR4 267 aa14.35□□□□□ -0.11
CDC42BPB-209ENST00000634889 HGH1Q9BTY7 390 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms