RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 COL28A1Q2UY09 1125 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 DNTTIP2Q5QJE6 756 aaKnown RBP20.32■□□□□ 0.84
SF1-221ENST00000633899 DCAF12Q5T6F0 453 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 NEPROQ6NW34 567 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 PRSS42Q7Z5A4 293 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 TMEM135Q86UB9 458 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 KRT222Q8N1A0 295 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 PHC3Q8NDX5 983 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 OR4E2Q8NGC2 313 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 FCRL3Q96P31 734 aaPredicted RBP20.32■□□□□ 0.84
SF1-221ENST00000633899 TRIM51Q9BSJ1 452 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 DDA1Q9BW61 102 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 ASPSCR1Q9BZE9 553 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 TRIT1Q9H3H1 467 aaKnown RBP20.32■□□□□ 0.84
SF1-221ENST00000633899 SRMSQ9H3Y6 488 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 IL1RAPL1Q9NZN1 696 aa20.32■□□□□ 0.84
SF1-221ENST00000633899 C9orf172C9J069 976 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 SMAPO00193 183 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 NDC80O14777 642 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 KPNA5O15131 536 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 KDM1AO60341 852 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 PGAM1P18669 254 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 CCR7P32248 378 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 ARCN1P48444 511 aaKnown RBP20.31■□□□□ 0.84
SF1-221ENST00000633899 ARL4DP49703 201 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 FOXM1Q08050 763 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 PRKG2Q13237 762 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 LONRF1Q17RB8 773 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 ZNF470Q6ECI4 717 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 CEACAM20Q6UY09 585 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 OTOAQ7RTW8 1153 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 LKAAEAR1Q8TD35 194 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 UBXN4Q92575 508 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 SNF8Q96H20 258 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 SIGLEC10Q96LC7 697 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 TEFMQ96QE5 360 aaKnown RBP20.31■□□□□ 0.84
SF1-221ENST00000633899 CD180Q99467 661 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 TRIM31Q9BZY9 425 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 P2RY12Q9H244 342 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 ZNF768Q9H5H4 540 aaKnown RBP20.31■□□□□ 0.84
SF1-221ENST00000633899 C20orf96Q9NUD7 363 aaPredicted RBP20.31■□□□□ 0.84
SF1-221ENST00000633899 FOXJ2Q9P0K8 574 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 PCDHB11Q9Y5F2 797 aa20.31■□□□□ 0.84
SF1-221ENST00000633899 EFCAB8A8MWE9 144 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 H3BMM5 538 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 MATN2O00339 956 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 LIPCP11150 499 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 FMO4P31512 558 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 UCNP55089 124 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 PPP1CAP62136 330 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 MC2RQ01718 297 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 DHX9Q08211 1270 aaKnown RBP20.3■□□□□ 0.84
SF1-221ENST00000633899 BBS9Q3SYG4 887 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 ANKS6Q68DC2 871 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 CILP2Q8IUL8 1156 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 SLC22A15Q8IZD6 547 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 PDIK1LQ8N165 341 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.3■□□□□ 0.84
SF1-221ENST00000633899 OR52E1Q8NGJ3 308 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 GABPB2Q8TAK5 448 aaPredicted RBP20.3■□□□□ 0.84
SF1-221ENST00000633899 CALML6Q8TD86 181 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 LPGAT1Q92604 370 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 NAT9Q9BTE0 207 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 CCDC68Q9H2F9 335 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 INTS10Q9NVR2 710 aaKnown RBP20.3■□□□□ 0.84
SF1-221ENST00000633899 POLG2Q9UHN1 485 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 ACSL6Q9UKU0 697 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 LHX6Q9UPM6 363 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 CRYL1Q9Y2S2 319 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 TDRKHQ9Y2W6 561 aaKnown RBP20.3■□□□□ 0.84
SF1-221ENST00000633899 PCDHGA3Q9Y5H0 932 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 ZZEF1O43149 2961 aa20.3■□□□□ 0.84
SF1-221ENST00000633899 PKD1L2Q7Z442 2459 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 ZCWPW2A0A1B0GU75 182 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 GSAPA4D1B5 854 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 TLCD2A6NGC4 264 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 POLR1CO15160 346 aaPredicted RBP20.29■□□□□ 0.84
SF1-221ENST00000633899 KIF1CO43896 1103 aaKnown RBP20.29■□□□□ 0.84
SF1-221ENST00000633899 TTC4O95801 387 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 ESR1P03372 595 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 RPN2P04844 631 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 POLR2CP19387 275 aaPredicted RBP20.29■□□□□ 0.84
SF1-221ENST00000633899 ACADLP28330 430 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 ITGA8P53708 1063 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 TLE3Q04726 772 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 CYB5D1Q6P9G0 228 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 ZFAND4Q86XD8 727 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 LMNTD2Q8IXW0 634 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 TBC1D21Q8IYX1 336 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 BMPERQ8N8U9 685 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 SPATA4Q8NEY3 305 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 OR5AR1Q8NGP9 310 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 SKA2Q8WVK7 121 aaPredicted RBP20.29■□□□□ 0.84
SF1-221ENST00000633899 C16orf45Q96MC5 204 aaPredicted RBP20.29■□□□□ 0.84
SF1-221ENST00000633899 CTRCQ99895 268 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 ZPBPQ9BS86 351 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 TFB2MQ9H5Q4 396 aaKnown RBP20.29■□□□□ 0.84
SF1-221ENST00000633899 FBXO8Q9NRD0 319 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 B3GALT1Q9Y5Z6 326 aa20.29■□□□□ 0.84
SF1-221ENST00000633899 SDK2Q58EX2 2172 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms