RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, human

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDRT1-208	ENST00000630868	C10orf76	Q5T2E6	689 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	C6orf163	Q5TEZ5	329 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	VWA5B1	Q5TIE3	1220 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	DAB2IP	Q5VWQ8	1189 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	KIAA0895L	Q68EN5	471 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	TMEM211	Q6ICI0	200 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	ANKRD54	Q6NXT1	300 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	CPLX2	Q6PUV4	134 aa	Known RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	ADIPOR2	Q86V24	386 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	CIR1	Q86X95	450 aa	Predicted RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	LURAP1L	Q8IV03	231 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	TMEM151B	Q8IW70	566 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	SLC35F3	Q8IY50	421 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	RNF168	Q8IYW5	571 aa	Predicted RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	IQUB	Q8NA54	791 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	MCU	Q8NE86	351 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	OR14L1P	Q8NHC6	308 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868		Q8TCH9	128 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	TMEM68	Q96MH6	324 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	DACH2	Q96NX9	599 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	NEK1	Q96PY6	1258 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	SEPT5	Q99719	369 aa	Predicted RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	AIFM2	Q9BRQ8	373 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	RNF41	Q9H4P4	317 aa	Predicted RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	SERTAD4	Q9NUC0	356 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	PDRG1	Q9NUG6	133 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	AKAP7	Q9P0M2	348 aa	Predicted RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	TES	Q9UGI8	421 aa	Known RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	RALY	Q9UKM9	306 aa	Known RBP	4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	ZNF148	Q9UQR1	794 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	MAU2	Q9Y6X3	613 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	CEP295	Q9C0D2	2601 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	IGSF9B	Q9UPX0	1349 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	DOCK5	Q9H7D0	1870 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	ADAMTS20	P59510	1910 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	ZFYVE26	Q68DK2	2539 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	FANCM	Q8IYD8	2048 aa		4.62	□□□□□ -1.67
CDRT1-208	ENST00000630868	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	LAMA4	Q16363	1823 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	EDDM13	A0A1B0GTR0	161 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	GSTTP1	A0A1W2PQM5	241 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	C1orf226	A1L170	272 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	KDM4E	B2RXH2	506 aa	Predicted RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	C2CD4D	B7Z1M9	353 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	FAM157A	C9JC47	383 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	CCDC188	H7C350	402 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	INO80B-WBP1	J3KQ70	363 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	RRH	O14718	337 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	MPPED1	O15442	326 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	ZBTB14	O43829	449 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	PEX1	O43933	1283 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	TRUB2	O95900	331 aa	Known RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	MT-CO3	P00414	261 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	CD63	P08962	238 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	POLR2M	P0CAP2	368 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	STAG3L1	P0CL83	205 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	P4HA1	P13674	534 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	PTPN3	P26045	913 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	CD52	P31358	61 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	PTGER1	P34995	402 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	HSD17B7	P56937	341 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	TAS2R40	P59535	323 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	MRPS6	P82932	125 aa	Known RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	ADORA2A-AS1	P86434	159 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	TRAF1	Q13077	416 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	KLF10	Q13118	480 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	RCN2	Q14257	317 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	TBC1D25	Q3MII6	688 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	PLK5	Q496M5	336 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	SYTL3	Q4VX76	610 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	SETMAR	Q53H47	684 aa	Predicted RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	RARS2	Q5T160	578 aa	Known RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	TCERG1L	Q5VWI1	586 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	TMEM268	Q5VZI3	342 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	NAPRT	Q6XQN6	538 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	SPATA19	Q7Z5L4	167 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	PEG10	Q86TG7	708 aa	Known RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	RBM23	Q86U06	439 aa	Known RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	TSPAN33	Q86UF1	283 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	HAPLN4	Q86UW8	402 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	RBM15B	Q8NDT2	890 aa	Known RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	RASSF8	Q8NHQ8	419 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	UTP15	Q8TED0	518 aa	Known RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	HDAC7	Q8WUI4	952 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	DNAJB3	Q8WWF6	145 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	KAT2A	Q92830	837 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	MYEOV	Q96EZ4	313 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	RRNAD1	Q96FB5	475 aa	Known RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	PDLIM5	Q96HC4	596 aa	Known RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868		Q96MF0	132 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	NECTIN4	Q96NY8	510 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	MXRA8	Q9BRK3	442 aa		4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	MLPH	Q9BV36	600 aa	Predicted RBP	4.61	□□□□□ -1.67
CDRT1-208	ENST00000630868	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms