RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 ALKBH5Q6P6C2 394 aaKnown RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 PQLC2Q6ZP29 291 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 DPPA4Q7L190 304 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 CTU1Q7Z7A3 348 aaKnown RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 SDCCAG8Q86SQ7 713 aaPredicted RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 TSPAN33Q86UF1 283 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 CCDC190Q86UF4 302 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 TUSC5Q8IXB3 177 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 KLHL7Q8IXQ5 586 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 LMNTD2Q8IXW0 634 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 ZDHHC23Q8IYP9 409 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 FBXO39Q8N4B4 442 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 SCCPDHQ8NBX0 429 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 RBM15BQ8NDT2 890 aaKnown RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 TRPC4APQ8TEL6 797 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 KRT35Q92764 455 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 PTP4A1Q93096 173 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 ZNF333Q96JL9 665 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 CABS1Q96KC9 395 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 ACOX2Q99424 681 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 TUBB2BQ9BVA1 445 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 GPR88Q9GZN0 384 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 MVB12BQ9H7P6 319 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 NOL11Q9H8H0 719 aaKnown RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 ANKZF1Q9H8Y5 726 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 CNOT10Q9H9A5 744 aaKnown RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 EPB41L5Q9HCM4 733 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 CHMP1AQ9HD42 196 aaPredicted RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 DDX4Q9NQI0 724 aaKnown RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 CYSLTR2Q9NS75 346 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 RNF146Q9NTX7 359 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 ABCB8Q9NUT2 735 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 OLAHQ9NV23 265 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 CISD1Q9NZ45 108 aaKnown RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 DNAJB4Q9UDY4 337 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 ARMCX3Q9UH62 379 aaPredicted RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 IL17BQ9UHF5 180 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 MOSPD1Q9UJG1 213 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 WBP11Q9Y2W2 641 aaKnown RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 LIPGQ9Y5X9 500 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 PTGDR2Q9Y5Y4 395 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 CLIC4Q9Y696 253 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 SLC4A4Q9Y6R1 1079 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 RIMS2Q9UQ26 1411 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 CDC42BPAQ5VT25 1732 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 WDR90Q96KV7 1748 aa3.16□□□□□ -1.9
VPS8-228ENST00000628962 MARF1Q9Y4F3 1742 aaKnown RBP3.16□□□□□ -1.9
VPS8-228ENST00000628962 METP08581 1390 aa3.15□□□□□ -1.9
VPS8-228ENST00000628962 A0A1B0GVT2 93 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 HTR3EA5X5Y0 456 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 ENO4A6NNW6 628 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 ERI2A8K979 691 aaKnown RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 RTCAO00442 366 aaKnown RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 HSPB6O14558 160 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 MAP2K7O14733 419 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 ZNF263O14978 683 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 SMAD9O15198 467 aaKnown RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 TNRC18O15417 2968 aaPredicted RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 SPRY1O43609 319 aaPredicted RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 ZBTB11O95625 1053 aaPredicted RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 GH2P01242 217 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 SRCP12931 536 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 PFKFB1P16118 471 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 PDGFRAP16234 1089 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 PRLRP16471 622 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 CD58P19256 250 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 CASTP20810 708 aaKnown RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 ACHEP22303 614 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 UBA1P22314 1058 aaKnown RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 CHATP28329 748 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 HOXD3P31249 432 aaPredicted RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 HOXC9P31274 260 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 TAF6P49848 677 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 ABATP80404 500 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 POU3F1Q03052 451 aaPredicted RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 MZT1Q08AG7 82 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 FAM27E3Q08E93 113 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 SREBF2Q12772 1141 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 GPS2Q13227 327 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 RBM39Q14498 530 aaKnown RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 ZNF273Q14593 569 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 PKN2Q16513 984 aaKnown RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 FAM98BQ52LJ0 330 aaKnown RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 DNAJC21Q5F1R6 531 aaKnown RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 ZRANB3Q5FWF4 1079 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 GLRA4Q5JXX5 417 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 SIGIRRQ6IA17 410 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 CNSTQ6PJW8 725 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 MEX3BQ6ZN04 569 aaKnown RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 CACNA2D4Q7Z3S7 1137 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 SPATA21Q7Z572 469 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 LDB1Q86U70 411 aaPredicted RBP3.15□□□□□ -1.91
VPS8-228ENST00000628962 HOOK3Q86VS8 718 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 GPSM1Q86YR5 675 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 ERC1Q8IUD2 1116 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 SFTPA2Q8IWL1 248 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 HSCBQ8IWL3 235 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 SYCP3Q8IZU3 236 aa3.15□□□□□ -1.91
VPS8-228ENST00000628962 SPEM1Q8N4L4 309 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms