RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CUL3Q13618 768 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 PSAPL1Q6NUJ1 521 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 PGM2L1Q6PCE3 622 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 PIWIL4Q7Z3Z4 852 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 MIEF2Q96C03 454 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 LINGO1Q96FE5 620 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 DTD2Q96FN9 168 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 ZNF514Q96K75 400 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 GPR22Q99680 433 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 THTPAQ9BU02 230 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 EFHD1Q9BUP0 239 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 NUSAP1Q9BXS6 441 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 ABCG4Q9H172 646 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 SERGEFQ9UGK8 458 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 CORO1CQ9ULV4 474 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 ESR1P03372 595 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 ATP1B2P14415 290 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 ATP5F1P24539 256 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 STARD6P59095 220 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 NAA20P61599 178 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 BLMHQ13867 455 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 RCN1Q15293 331 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 C11orf74Q86VG3 221 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 ULK2Q8IYT8 1036 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 AGR3Q8TD06 166 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 SETD7Q8WTS6 366 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 MRM3Q9HC36 420 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 ARL15Q9NXU5 204 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 A6NHS1 94 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 SYCE1LA8MT33 242 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 IQCF5A8MTL0 148 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 SMNDC1O75940 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 LTA4HP09960 611 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 JUNDP17535 347 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 SERPINB5P36952 375 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 IRF4Q15306 451 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 RBBP7Q16576 425 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 LIPMQ5VYY2 423 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 EPGNQ6UW88 154 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 ZC3HC1Q86WB0 502 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 RAP2CQ9Y3L5 183 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 CHD5Q8TDI0 1954 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 OR1I1O60431 355 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 SORBS2O94875 1100 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 ACTR3P61158 418 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 NRSN1Q8IZ57 195 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 CENPLQ8N0S6 344 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 ZNF781Q8N8C0 355 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 DTWD2Q8NBA8 298 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 OR10G6Q8NH81 332 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 GABRG3Q99928 467 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 Q9H521 79 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 ZNF385DQ9H6B1 395 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 TCF7L2Q9NQB0 619 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 MARCH4Q9P2E8 410 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 PTPRSQ13332 1948 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 TRPM6Q9BX84 2022 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 H0Y858 1186 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 PSMD11O00231 422 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 ACADSP16219 412 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 CD38P28907 300 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 PEX6Q13608 980 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 PHTF2Q8N3S3 785 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 NKAPQ8N5F7 415 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 PHF21BQ96EK2 531 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 DRC3Q9H069 523 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 ALG9Q9H6U8 611 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 CFAP20Q9Y6A4 193 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 KIAA1671Q9BY89 1806 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 NEMP2A6NFY4 417 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 BCAT2O15382 392 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 LATO43561 262 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 LDB2O43679 373 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 PRLP01236 227 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 SLC35E2BP0CK96 405 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 ALPPL2P10696 532 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 LHCGRP22888 699 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 CDKN1CP49918 316 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 RPL14P50914 215 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 TRMT5Q32P41 509 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 NET1Q7Z628 596 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 ZBTB2Q8N680 514 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 BTN2A2Q8WVV5 523 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 HGH1Q9BTY7 390 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 FAM126AQ9BYI3 521 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 ARNT2Q9HBZ2 717 aa12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 SPATS2LQ9NUQ6 558 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 APOBEC3BQ9UH17 382 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-207ENST00000628646 CFLARO15519 480 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 PI15O43692 258 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 C1SP09871 688 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 STX5Q13190 355 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 METTL21CQ5VZV1 264 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 LAYNQ6UX15 382 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 SPNS2Q8IVW8 549 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 SCUBE1Q8IWY4 988 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 CPNE9Q8IYJ1 553 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 SIDT2Q8NBJ9 832 aaKnown RBP12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 PLEKHG4BQ96PX9 1271 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 APOOQ9BUR5 198 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms