RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 POC1B-GALNT4F8VUJ3 575 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 ZW10O43264 779 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 PGLSO95336 258 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 CCR10P46092 362 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 PPP2R2AP63151 447 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 GPLD1P80108 840 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 MGAT5Q09328 741 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 SLC1A5Q15758 541 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 DOK6Q6PKX4 331 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 ADAMTSL4Q6UY14 1074 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 CAPN12Q6ZSI9 719 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 EXOC3L1Q86VI1 746 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 SFRP1Q8N474 314 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 PAF1Q8N7H5 531 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 DCAKDQ8WVC6 231 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 ZBTB9Q96C00 473 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 AGAP2Q99490 1192 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 PSD3Q9NYI0 1048 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 RIMKLBQ9ULI2 386 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 IKBKGQ9Y6K9 419 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 RPS6KL1Q9Y6S9 549 aa23.69■■□□□ 1.38
CAPNS1-216ENST00000628306 ZCWPW2A0A1B0GU75 182 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 SMIM23A6NLE4 172 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 CNTFP26441 200 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 SERPINB9P50453 376 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 SLC18A1P54219 525 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 MC2RQ01718 297 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 DCAF12Q5T6F0 453 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 FAM129CQ86XR2 697 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.68■■□□□ 1.386e-6■■■■■ 47.7
CAPNS1-216ENST00000628306 COX14Q96I36 57 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 CATSPER2Q96P56 530 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 CD84Q9UIB8 345 aa23.68■■□□□ 1.38
CAPNS1-216ENST00000628306 IQANK1A0A1B0GTG1 560 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 FZD6O60353 706 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 INHBAP08476 426 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 PDHA1P08559 390 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 CYP2A6P11509 494 aaPredicted RBP23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 RAB15P59190 212 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 GABPB1Q06547 395 aaPredicted RBP23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 OLIG2Q13516 323 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 MARK2Q7KZI7 788 aaKnown RBP23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 TRABD2AQ86V40 505 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 UNC5BQ8IZJ1 945 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 CYP4X1Q8N118 509 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 SCAMP4Q969E2 229 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 TRIB3Q96RU7 358 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 CTRCQ99895 268 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 APOL2Q9BQE5 337 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 APMAPQ9HDC9 416 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 SSU72Q9NP77 194 aaKnown RBP23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 ZNF71Q9NQZ8 489 aaPredicted RBP23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 ANAPC2Q9UJX6 822 aa23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 SPTAN1Q13813 2472 aaKnown RBP23.67■■□□□ 1.38
CAPNS1-216ENST00000628306 TRBV23OR9-2A0A075B6M9 112 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 HEATR9A2RTY3 570 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 NDST3O95803 873 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 CTPS1P17812 591 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 CA4P22748 312 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 GPR1P46091 355 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 CRADDP78560 199 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 PTSQ03393 145 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 CDC20Q12834 499 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 PPHLN1Q8NEY8 458 aaKnown RBP23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 MTBPQ96DY7 904 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 CERS2Q96G23 380 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 CHRAC1Q9NRG0 131 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 TCAF1Q9Y4C2 921 aa23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 TMEM184BQ9Y519 407 aaPredicted RBP23.66■■□□□ 1.38
CAPNS1-216ENST00000628306 A6NCN8 305 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 CAPN5O15484 640 aaPredicted RBP23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 PRKAR1AP10644 381 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 TPH1P17752 444 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 BIRC2Q13490 618 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 PEX6Q13608 980 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 LRRC66Q68CR7 880 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 TRMT10BQ6PF06 316 aaKnown RBP23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 WDR74Q6RFH5 385 aaPredicted RBP23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 NLRP8Q86W28 1048 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 NLGN4XQ8N0W4 816 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 NLGN4YQ8NFZ3 816 aaPredicted RBP23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 C9orf43Q8TAL5 461 aaPredicted RBP23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 ALKBH8Q96BT7 664 aaKnown RBP23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 TEFMQ96QE5 360 aaKnown RBP23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 NSMCE4AQ9NXX6 385 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 DNAJC6O75061 913 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 DLGAP3O95886 979 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 MAP4P27816 1152 aaKnown RBP23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 ILF2Q12905 390 aaKnown RBP23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 ATP1A1-AS1Q5TC04 95 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 PDPK2PQ6A1A2 396 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 ZNF765Q7L2R6 523 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 NRSN1Q8IZ57 195 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 PPM1NQ8N819 430 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 MZB1Q8WU39 189 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 AP2M1Q96CW1 435 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 ABHD17AQ96GS6 310 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 GPN2Q9H9Y4 310 aaPredicted RBP23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 FBXO8Q9NRD0 319 aa23.65■■□□□ 1.38
CAPNS1-216ENST00000628306 SMYD2Q9NRG4 433 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms