RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PADI4Q9UM07 663 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 TRBV23OR9-2A0A075B6M9 112 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 SLC5A10A0PJK1 596 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 CPED1A4D0V7 1026 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 RIPK2O43353 540 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 C1QAP02745 245 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 UAP1Q16222 522 aaPredicted RBP14.38□□□□□ -0.11
PNKP-221ENST00000627317 KLHL38Q2WGJ6 581 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 TTLL9Q3SXZ7 439 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 FAM45BPQ6NSW5 357 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 EMBQ6PCB8 327 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 ABRAXAS1Q6UWZ7 409 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 XKR5Q6UX68 686 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 SLC9B2Q86UD5 537 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 ZC3HC1Q86WB0 502 aaKnown RBP14.38□□□□□ -0.11
PNKP-221ENST00000627317 C17orf82Q86X59 251 aaPredicted RBP14.38□□□□□ -0.11
PNKP-221ENST00000627317 SFRP1Q8N474 314 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 ARL14Q8N4G2 192 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 ZBTB2Q8N680 514 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 OR6C4Q8NGE1 309 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 FAM45AQ8TCE6 357 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 UBLCP1Q8WVY7 318 aaPredicted RBP14.38□□□□□ -0.11
PNKP-221ENST00000627317 MRRFQ96E11 262 aaKnown RBP14.38□□□□□ -0.11
PNKP-221ENST00000627317 VPS39Q96JC1 886 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 ELMO2Q96JJ3 720 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 RMDN2Q96LZ7 410 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 C12orf66Q96MD2 445 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 GPR21Q99679 349 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 FUT8Q9BYC5 575 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 IMP3Q9NV31 184 aaKnown RBP14.38□□□□□ -0.11
PNKP-221ENST00000627317 TAS2R13Q9NYV9 303 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 TRMT6Q9UJA5 497 aaKnown RBP14.38□□□□□ -0.11
PNKP-221ENST00000627317 WDR37Q9Y2I8 494 aa14.38□□□□□ -0.11
PNKP-221ENST00000627317 FAM95CA0A1B0GW59 222 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 A0A1W2PNU3 283 aaPredicted RBP14.37□□□□□ -0.11
PNKP-221ENST00000627317 OR52A4PA6NMU1 304 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 RHPN2P1A8MT19 583 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 NTN3O00634 580 aaPredicted RBP14.37□□□□□ -0.11
PNKP-221ENST00000627317 BRAFP15056 766 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 PDHA2P29803 388 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 SPRP35270 261 aaPredicted RBP14.37□□□□□ -0.11
PNKP-221ENST00000627317 HHEXQ03014 270 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 NAA30Q147X3 362 aaPredicted RBP14.37□□□□□ -0.11
PNKP-221ENST00000627317 CLCA4Q14CN2 919 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 RPE65Q16518 533 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 MAP9Q49MG5 647 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 PLEKHS1Q5SXH7 462 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 GRTP1Q5TC63 336 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 HECTD2Q5U5R9 776 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 UGT3A1Q6NUS8 523 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 PDZD3Q86UT5 571 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 SIDT2Q8NBJ9 832 aaKnown RBP14.37□□□□□ -0.11
PNKP-221ENST00000627317 SPDYE1Q8NFV5 336 aaPredicted RBP14.37□□□□□ -0.11
PNKP-221ENST00000627317 SKA2Q8WVK7 121 aaPredicted RBP14.37□□□□□ -0.11
PNKP-221ENST00000627317 CCDC74AQ96AQ1 378 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 RBBP8Q99708 897 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 CCDC3Q9BQI4 270 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 OR52A5Q9H2C5 316 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 SCHIP1Q9P0W5 487 aaPredicted RBP14.37□□□□□ -0.11
PNKP-221ENST00000627317 KLHL42Q9P2K6 505 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 CPNE7Q9UBL6 633 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 TSR3Q9UJK0 312 aaKnown RBP14.37□□□□□ -0.11
PNKP-221ENST00000627317 RAB21Q9UL25 225 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 RAXQ9Y2V3 346 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 HEBP2Q9Y5Z4 205 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 CFAP20Q9Y6A4 193 aaKnown RBP14.37□□□□□ -0.11
PNKP-221ENST00000627317 IKBKGQ9Y6K9 419 aa14.37□□□□□ -0.11
PNKP-221ENST00000627317 ACACAQ13085 2346 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 EXOC1LA0A1B0GW35 172 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 CSO75390 466 aaKnown RBP14.36□□□□□ -0.11
PNKP-221ENST00000627317 GPC4O75487 556 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 TCEA3O75764 348 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 VIPP01282 170 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 INHBAP08476 426 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 MTHFD1P11586 935 aaKnown RBP14.36□□□□□ -0.11
PNKP-221ENST00000627317 GLB1P16278 677 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 SAT1P21673 171 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 FASLGP48023 281 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 CLCN7P51798 805 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 LIMK2P53671 638 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 SLC12A2P55011 1212 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 CDKN2DP55273 166 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 UBE2IP63279 158 aaKnown RBP14.36□□□□□ -0.11
PNKP-221ENST00000627317 PDAP1Q13442 181 aaKnown RBP14.36□□□□□ -0.11
PNKP-221ENST00000627317 KRT33BQ14525 404 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 ISXQ2M1V0 245 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 TAOK1Q7L7X3 1001 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 PIM3Q86V86 326 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 SLC22A15Q8IZD6 547 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 GIMAP7Q8NHV1 300 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 AENQ8WTP8 325 aaKnown RBP14.36□□□□□ -0.11
PNKP-221ENST00000627317 INPP5DQ92835 1189 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 DEPDC7Q96QD5 511 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 POT1Q9NUX5 634 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 LRIT1Q9P2V4 623 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 GALPQ9UBC7 116 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 MED16Q9Y2X0 877 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 DHRS7Q9Y394 339 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 RNF215Q9Y6U7 377 aa14.36□□□□□ -0.11
PNKP-221ENST00000627317 LOC400499M0QZD8 3231 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms