RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 PRKAR1AP10644 381 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 ITGB6P18564 788 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 TCN2P20062 427 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 RPL22P35268 128 aaKnown RBP10.54□□□□□ -0.72
SSBP4-215ENST00000625926 DLSTP36957 453 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 PPARGP37231 505 aaPredicted RBP10.54□□□□□ -0.72
SSBP4-215ENST00000625926 PREPP48147 710 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 ARCN1P48444 511 aaKnown RBP10.54□□□□□ -0.72
SSBP4-215ENST00000625926 KPNA2P52292 529 aaKnown RBP10.54□□□□□ -0.72
SSBP4-215ENST00000625926 TUBB4BP68371 445 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 PLOD1Q02809 727 aaPredicted RBP10.54□□□□□ -0.72
SSBP4-215ENST00000625926 ACVR1Q04771 509 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 CDC20Q12834 499 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 NFATC3Q12968 1075 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 TUBB2AQ13885 445 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 SIX1Q15475 284 aaPredicted RBP10.54□□□□□ -0.72
SSBP4-215ENST00000625926 CRTC2Q53ET0 693 aaPredicted RBP10.54□□□□□ -0.72
SSBP4-215ENST00000625926 PWWP2BQ6NUJ5 590 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 C16orf46Q6P387 395 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 AFTPHQ6ULP2 937 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 C4orf22Q6V702 233 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 PACS1Q6VY07 963 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 GSTA5Q7RTV2 222 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 GLIS1Q8NBF1 620 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 OR52E1Q8NGJ3 308 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 OR6P1Q8NGX9 317 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 OR4L1Q8NH43 312 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 ELMO1Q92556 727 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 PEX13Q92968 403 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 RNF31Q96EP0 1072 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 TUBB2BQ9BVA1 445 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 TLR10Q9BXR5 811 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 FAM117AQ9C073 453 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 ADNPQ9H2P0 1102 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 LHX9Q9NQ69 397 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 C1GALT1Q9NS00 363 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 KCND1Q9NSA2 647 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 STARD5Q9NSY2 213 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 SLC2A6Q9UGQ3 507 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 KCND3Q9UK17 655 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 CROTQ9UKG9 612 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 POMT2Q9UKY4 750 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 TCAF1Q9Y4C2 921 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 PCDHB3Q9Y5E6 796 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 HEMK1Q9Y5R4 338 aaPredicted RBP10.54□□□□□ -0.72
SSBP4-215ENST00000625926 PRSS21Q9Y6M0 314 aa10.54□□□□□ -0.72
SSBP4-215ENST00000625926 PTPRQQ9UMZ3 2332 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 SPTA1P02549 2419 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 GSAPA4D1B5 854 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 SLC9B1P1A6NJY1 282 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 J3QKU1 62 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 AP3B1O00203 1094 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 BTN3A3O00478 584 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 MAP3K7O43318 606 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 CEP104O60308 925 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 KATNA1O75449 491 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 TIAF1O95411 115 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 NTRK1P04629 796 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 CDH3P22223 829 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 F8A1P23610 371 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 PRDX3P30048 256 aaKnown RBP10.53□□□□□ -0.72
SSBP4-215ENST00000625926 POLE2P56282 527 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 PRAMEP78395 509 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 PRKG2Q13237 762 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 BOP1Q14137 746 aaKnown RBP10.53□□□□□ -0.72
SSBP4-215ENST00000625926 BRD3Q15059 726 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 FASTKD1Q53R41 847 aaKnown RBP10.53□□□□□ -0.72
SSBP4-215ENST00000625926 PCID2Q5JVF3 399 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 AMIGO1Q86WK6 493 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 PPHLN1Q8NEY8 458 aaKnown RBP10.53□□□□□ -0.72
SSBP4-215ENST00000625926 OR8K5Q8NH50 307 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 SGSM3Q96HU1 749 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 PPM1MQ96MI6 270 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 ZNF778Q96MU6 729 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 SLC25A18Q9H1K4 315 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 EIF2B3Q9NR50 452 aaKnown RBP10.53□□□□□ -0.72
SSBP4-215ENST00000625926 HOMER3Q9NSC5 361 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 SOHLH2Q9NX45 425 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 TUBD1Q9UJT1 453 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 ANAPC5Q9UJX4 755 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 BTRCQ9Y297 605 aa10.53□□□□□ -0.72
SSBP4-215ENST00000625926 SLC5A10A0PJK1 596 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 C2orf74A8MZ97 194 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 C21orf140B9A014 251 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 BTN3A1O00481 513 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 TERTO14746 1132 aaKnown RBP10.52□□□□□ -0.73
SSBP4-215ENST00000625926 SLC28A2O43868 658 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 OR1I1O60431 355 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 SCRG1O75711 98 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 RECKO95980 971 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 ACADLP28330 430 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 OAS2P29728 719 aaKnown RBP10.52□□□□□ -0.73
SSBP4-215ENST00000625926 KCNJ1P48048 391 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 NPY2RP49146 381 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 BASP1P80723 227 aaKnown RBP10.52□□□□□ -0.73
SSBP4-215ENST00000625926 CCZ1BP86790 482 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 CCZ1P86791 482 aaPredicted RBP10.52□□□□□ -0.73
SSBP4-215ENST00000625926 KCNAB2Q13303 367 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 GPR19Q15760 415 aa10.52□□□□□ -0.73
SSBP4-215ENST00000625926 DEFB109BQ30KR1 87 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms