RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CLCN5P51795 746 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 CDKN2DP55273 166 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 TOP3AQ13472 1001 aaPredicted RBP12.26□□□□□ -0.45
LITAF-221ENST00000622633 ZMYND11Q15326 602 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 PITRM1Q5JRX3 1037 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 CATSPEREQ5SY80 951 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 GPR158Q5T848 1215 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 SPATC1Q76KD6 591 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 ERMP1Q7Z2K6 904 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 PIM3Q86V86 326 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 PSMA8Q8TAA3 256 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 HDAC10Q969S8 669 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 SLCO4A1Q96BD0 722 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 CCDC126Q96EE4 140 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 RIPOR3Q96MK2 946 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 SEC22CQ9BRL7 303 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 LHPPQ9H008 270 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 SLC25A51Q9H1U9 297 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 SMOC2Q9H3U7 446 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 SP110Q9HB58 689 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 KCTD3Q9Y597 815 aa12.26□□□□□ -0.45
LITAF-221ENST00000622633 A0A1W2PQH9 124 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 A8MV72 311 aaPredicted RBP12.25□□□□□ -0.45
LITAF-221ENST00000622633 SOCS2O14508 198 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 SUPT7LO94864 414 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 PEX11BO96011 259 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 HMGN1P05114 100 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 ITGB1P05556 798 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 PCSK2P16519 638 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 HOXC8P31273 242 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 PPP5CP53041 499 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 DSC2Q02487 901 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 RUNX1T1Q06455 604 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 CACNB2Q08289 660 aaPredicted RBP12.25□□□□□ -0.45
LITAF-221ENST00000622633 SLC10A7Q0GE19 358 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 PSMD5Q16401 504 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 FBXO43Q4G163 708 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 ZNF544Q6NX49 715 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 KIAA1324Q6UXG2 1013 aaKnown RBP12.25□□□□□ -0.45
LITAF-221ENST00000622633 SLC16A12Q6ZSM3 486 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 SCN4BQ8IWT1 228 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 OR6Q1Q8NGQ2 317 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 OR13J1Q8NGT2 312 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 VANGL1Q8TAA9 524 aaPredicted RBP12.25□□□□□ -0.45
LITAF-221ENST00000622633 HMCESQ96FZ2 354 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 BTN2A3PQ96KV6 586 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 PPP1R2P1Q96PQ5 205 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 TRIM62Q9BVG3 475 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 GSTO2Q9H4Y5 243 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 EPS8L2Q9H6S3 715 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 ZC4H2Q9NQZ6 224 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 MARCH4Q9P2E8 410 aaPredicted RBP12.25□□□□□ -0.45
LITAF-221ENST00000622633 CYB5R1Q9UHQ9 305 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 TMEM5Q9Y2B1 443 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 DOCK3Q8IZD9 2030 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 MYLKQ15746 1914 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 PDZK1P1A8MUH7 402 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 MRASO14807 208 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 ZNF780AO75290 641 aaPredicted RBP12.25□□□□□ -0.45
LITAF-221ENST00000622633 UGT2B11O75310 529 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 PTP4A3O75365 173 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 SLC4A1P02730 911 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 IFNA16P05015 189 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 OR4Q2P0C623 313 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 MBL2P11226 248 aaPredicted RBP12.25□□□□□ -0.45
LITAF-221ENST00000622633 ITGALP20701 1170 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 DDOSTP39656 456 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 YAP1P46937 504 aaKnown RBP12.25□□□□□ -0.45
LITAF-221ENST00000622633 PSMD8P48556 350 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 SEPHS1P49903 392 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 CDH13P55290 713 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 NME5P56597 212 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 RHDQ02161 417 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 SDHAF4Q5VUM1 108 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 OVOS1Q6IE37 1185 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 CYHR1Q6ZMK1 362 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 ZBTB49Q6ZSB9 765 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 CILP2Q8IUL8 1156 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 EXT2Q93063 718 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 PABPC5Q96DU9 382 aaKnown RBP12.25□□□□□ -0.45
LITAF-221ENST00000622633 TSPAN17Q96FV3 270 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 IMP4Q96G21 291 aaKnown RBP12.25□□□□□ -0.45
LITAF-221ENST00000622633 UBXN10Q96LJ8 280 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 C3orf30Q96M34 536 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 SLC6A17Q9H1V8 727 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 SPAG4Q9NPE6 437 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 OSER1Q9NX31 292 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 EMC3Q9P0I2 261 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 CRYL1Q9Y2S2 319 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 SNX13Q9Y5W8 968 aa12.25□□□□□ -0.45
LITAF-221ENST00000622633 ZNF236Q9UL36 1845 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 NRP2O60462 931 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 CLIC3O95833 236 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 HAPLN1P10915 354 aaPredicted RBP12.24□□□□□ -0.45
LITAF-221ENST00000622633 ERVK-21P61565 698 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 HIST2H2ACQ16777 129 aaPredicted RBP12.24□□□□□ -0.45
LITAF-221ENST00000622633 PIK3R6Q5UE93 754 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 STEAP3Q658P3 488 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 XAF1Q6GPH4 301 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms