RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 SCRN2Q96FV2 425 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 TOX2Q96NM4 488 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 HBEGFQ99075 208 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 CAAP1Q9H8G2 361 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 SMPD3Q9NY59 655 aaPredicted RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 CRLS1Q9UJA2 301 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 INTS6Q9UL03 887 aaKnown RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 RNF103-CHMP3A0A140T963 221 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 CARNS1A5YM72 827 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 UPK1AO00322 258 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 EI24O14681 340 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 KATNA1O75449 491 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 TRIM16O95361 564 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GUCA1CO95843 209 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 IL6P05231 212 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 SPATA31D3P0C874 917 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 ITGB6P18564 788 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 SLC5A2P31639 672 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 CD70P32970 193 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 PIK3CGP48736 1102 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 DGKQP52824 942 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 TTLL9Q3SXZ7 439 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 PYCR3Q53H96 274 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GLYATQ6IB77 296 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 SPATA31D4Q6ZUB0 917 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 TPRG1Q6ZUI0 275 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 BBS7Q8IWZ6 715 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 LEMD2Q8NC56 503 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GPR26Q8NDV2 337 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 GTF2H4Q92759 462 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 MPP4Q96JB8 637 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 RPL10LQ96L21 214 aaKnown RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 NSMCE2Q96MF7 247 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 PPM1MQ96MI6 270 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 ZNF583Q96ND8 569 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 CHID1Q9BWS9 393 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 CLMPQ9H6B4 373 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 NTN4Q9HB63 628 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 KCTD5Q9NXV2 234 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 SPG21Q9NZD8 308 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 ZMYM5Q9UJ78 669 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 EIF3LQ9Y262 564 aaKnown RBP9.25□□□□□ -0.93
PDPN-212ENST00000621990 HS3ST2Q9Y278 367 aa9.25□□□□□ -0.93
PDPN-212ENST00000621990 MANBAO00462 879 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 TEX28O15482 410 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 KCNH1O95259 989 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 ASLP04424 464 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 CHRM1P11229 460 aaPredicted RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 SRCP12931 536 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 NELFEP18615 380 aaKnown RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 LAG3P18627 525 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 EPORP19235 508 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 CAPGP40121 348 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 GDF5P43026 501 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 RPS9P46781 194 aaKnown RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 CDK9P50750 372 aaKnown RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 MTPNP58546 118 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 RPL38P63173 70 aaKnown RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 B4GALNT1Q00973 533 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 ARHGEF6Q15052 776 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 AAK1Q2M2I8 961 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 TMEM259Q4ZIN3 620 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 PATL1Q86TB9 770 aaKnown RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 TSPAN33Q86UF1 283 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 TRIML2Q8N7C3 387 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 BHMTQ93088 406 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 BDH2Q9BUT1 245 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 CPEB1Q9BZB8 566 aaKnown RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 TNKS2Q9H2K2 1166 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.24□□□□□ -0.93
PDPN-212ENST00000621990 ZDHHC3Q9NYG2 299 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 WWOXQ9NZC7 414 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 CFAP97Q9P2B7 532 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 A0A087WXM4 84 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 TRBV5-3A0A0A0MS03 114 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 NPIPB8E9PQR5 432 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 H0YAE9 185 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 H3BSA7 217 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 ZNF701M0R085 212 aaPredicted RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 ULK1O75385 1050 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 RAP2AP10114 183 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 SLC2A4P14672 509 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 EPB42P16452 691 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 PFKLP17858 780 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 PRPH2P23942 346 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 ARL1P40616 181 aaPredicted RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 GNPDA1P46926 289 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 ADARB1P78563 741 aaKnown RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 PTSQ03393 145 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 PTGR1Q14914 329 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 GGTA1PQ4G0N0 100 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 SLC39A5Q6ZMH5 540 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 RALGPS2Q86X27 583 aaPredicted RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 MSRB3Q8IXL7 192 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 ADGRG2Q8IZP9 1017 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 ZNF548Q8NEK5 533 aaPredicted RBP9.24□□□□□ -0.93
PDPN-212ENST00000621990 DNAJB8Q8NHS0 232 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 AUTS2Q8WXX7 1259 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 EGFL8Q99944 293 aa9.24□□□□□ -0.93
PDPN-212ENST00000621990 APOL5Q9BWW9 433 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms