RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ANKRD52Q8NB46 1076 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 SCFD2Q8WU76 684 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 ZNF689Q96CS4 500 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-229ENST00000621897 GMPPAQ96IJ6 420 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-229ENST00000621897 POM121L2Q96KW2 1035 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 ABHD6Q9BV23 337 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 KRT84Q9NSB2 600 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 BARHL2Q9NY43 387 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 ODF2LQ9ULJ1 636 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 PRSS21Q9Y6M0 314 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 RNF215Q9Y6U7 377 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 SOS1Q07889 1333 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-229ENST00000621897 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 IGHV4-61A0A0C4DH41 118 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 PGPEP1LA6NFU8 196 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 K7ENM7 598 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 TO15178 435 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 IGHV4-59P01825 116 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 RB1P06400 928 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 PRLRP16471 622 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 GARSP41250 739 aaKnown RBP3.88□□□□□ -1.79
BRCA1-229ENST00000621897 SUOXP51687 545 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 BMXP51813 675 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 SNRPEP62304 92 aaKnown RBP3.88□□□□□ -1.79
BRCA1-229ENST00000621897 KCNJ10P78508 379 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 SP3Q02447 781 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 LGALS3BPQ08380 585 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 PNRC1Q12796 327 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-229ENST00000621897 PLA2G7Q13093 441 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 MAMLD1Q13495 774 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 DCAF10Q5QP82 559 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 PWWP2BQ6NUJ5 590 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 MAATS1Q7Z4T9 603 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 OR8H2Q8N162 312 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 GIMAP5Q96F15 307 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 PGAM5Q96HS1 289 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 CDHR1Q96JP9 859 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 FAM81BQ96LP2 452 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 MYADMQ96S97 322 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 TRAF4Q9BUZ4 470 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-229ENST00000621897 FTOQ9C0B1 505 aaKnown RBP eCLIP3.88□□□□□ -1.79
BRCA1-229ENST00000621897 HHATLQ9HCP6 504 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 ZDHHC18Q9NUE0 388 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 PLCXD1Q9NUJ7 323 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 PAK5Q9P286 719 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 KLHL8Q9P2G9 620 aaPredicted RBP3.88□□□□□ -1.79
BRCA1-229ENST00000621897 TTLL3Q9Y4R7 772 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 LYVE1Q9Y5Y7 322 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 ITIH6Q6UXX5 1313 aa3.88□□□□□ -1.79
BRCA1-229ENST00000621897 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 PI4KAP2A4QPH2 592 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 RSL1D1O76021 490 aaKnown RBP3.87□□□□□ -1.79
BRCA1-229ENST00000621897 HMBSP08397 361 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 HADHAP40939 763 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 PPARDQ03181 441 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 CRYMQ14894 314 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 SPECC1Q5M775 1068 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 CYP4A22Q5TCH4 519 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 ARMC3Q5W041 872 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 C1orf122Q6ZSJ8 110 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 BRINP3Q76B58 766 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 RSRC2Q7L4I2 434 aaKnown RBP3.87□□□□□ -1.79
BRCA1-229ENST00000621897 NDUFAF2Q8N183 169 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 OR2T6Q8NHC8 308 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 GRHL3Q8TE85 626 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 HSD17B8Q92506 261 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 MOAP1Q96BY2 351 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 ERLEC1Q96DZ1 483 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 MYCBPQ99417 103 aaPredicted RBP3.87□□□□□ -1.79
BRCA1-229ENST00000621897 EGFL8Q99944 293 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 C1QTNF1Q9BXJ1 281 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 PPIL3Q9H2H8 161 aaKnown RBP3.87□□□□□ -1.79
BRCA1-229ENST00000621897 ACKR4Q9NPB9 350 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 SEPT11Q9NVA2 429 aaKnown RBP3.87□□□□□ -1.79
BRCA1-229ENST00000621897 TAS2R14Q9NYV8 317 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 RHCGQ9UBD6 479 aa3.87□□□□□ -1.79
BRCA1-229ENST00000621897 COL2A1P02458 1487 aaPredicted RBP3.86□□□□□ -1.79
BRCA1-229ENST00000621897 IGHV4-4A0A075B6R2 117 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 A0A0J9YWU9 116 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 ELOVL7A1L3X0 281 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 A6NCN8 305 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 E9PI62 339 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 SORBS2O94875 1100 aaKnown RBP3.86□□□□□ -1.79
BRCA1-229ENST00000621897 AP2A2O94973 939 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 RAF1P04049 648 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 ACADMP11310 421 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 MMP9P14780 707 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 PSMA3P25788 255 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 KRTAP10-3P60369 221 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 DCAF7P61962 342 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 SNRPD1P62314 119 aaKnown RBP3.86□□□□□ -1.79
BRCA1-229ENST00000621897 GPR17Q13304 367 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 KCNC3Q14003 757 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 IRF3Q14653 427 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 MELKQ14680 651 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 FAM98BQ52LJ0 330 aaKnown RBP3.86□□□□□ -1.79
BRCA1-229ENST00000621897 GRTP1Q5TC63 336 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 Q6ZSR9 355 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 STXBP4Q6ZWJ1 553 aa3.86□□□□□ -1.79
BRCA1-229ENST00000621897 ZNF554Q86TJ5 538 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms