RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CDC7O00311 574 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 PIP5K1BO14986 540 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 UROSP10746 265 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 PPIBP23284 216 aaKnown RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 NTSR1P30989 418 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 IRF9Q00978 393 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 ZNF155Q12901 538 aaPredicted RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 PRAMEF14Q5SWL7 426 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 HEATR4Q86WZ0 1026 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 Q8N9G6 341 aaPredicted RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 PTCD3Q96EY7 689 aaKnown RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 SLC2A13Q96QE2 648 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 ENOPH1Q9UHY7 261 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 CDH7Q9ULB5 785 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 RP1P56715 2156 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 hCG_2014768A0A024R1R8 64 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 TOP3BO95985 862 aaKnown RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 CCNA2P20248 432 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 GGT5P36269 586 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 CCNFP41002 786 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 HYAL2Q12891 473 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 TMEM115Q12893 351 aaPredicted RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 PON2Q15165 354 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 ANGPT1Q15389 498 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 ALG11Q2TAA5 492 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 PRAMEF13Q5VWM6 474 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 TP53INP2Q8IXH6 220 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 APCDD1Q8J025 514 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 SCAIQ8N9R8 606 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 FGF13Q92913 245 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 C5orf34Q96MH7 638 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 C9orf16Q9BUW7 83 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 FNDC11Q9BVV2 318 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 WDR6Q9NNW5 1121 aaKnown RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 CCDC88AQ3V6T2 1871 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 ATXN2Q99700 1313 aaKnown RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 A8MUA0 341 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 MAN2B1O00754 1011 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 SUV39H1O43463 412 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 FAM20BO75063 409 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 EPOP01588 193 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 CYP11A1P05108 521 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 CD70P32970 193 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 LAPTM5Q13571 262 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 INO80DQ53TQ3 878 aaPredicted RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 SUSD1Q6UWL2 747 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 ZNF852Q6ZMS4 543 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 CYP2U1Q7Z449 544 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 OR52L1Q8NGH7 329 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 EEF1AKMT1Q8WVE0 214 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 SMPDL3AQ92484 453 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 TCEAL4Q96EI5 215 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 CLSTN3Q9BQT9 956 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 CCM2Q9BSQ5 444 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 ADI1Q9BV57 179 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 CD207Q9UJ71 328 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 ERVK-11Q9UQG0 969 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 C5P01031 1676 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 EP400Q96L91 3159 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 TMEM150CB9EJG8 249 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 ERI3O43414 337 aaKnown RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 IL6P05231 212 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 CHRNGP07510 517 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 CCDC159P0C7I6 412 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 VARSP26640 1264 aaKnown RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 RXRGP48443 463 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 POLR2JP52435 117 aaKnown RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 SLC34A1Q06495 639 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 QPCTQ16769 361 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 MSS51Q4VC12 460 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 EIF3MQ7L2H7 374 aaKnown RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 WDR36Q8NI36 951 aaKnown RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 JSRP1Q96MG2 331 aaPredicted RBP9.08□□□□□ -0.96
GGA3-223ENST00000621870 CASD1Q96PB1 797 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 APOL4Q9BPW4 351 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 RAB11FIP5Q9BXF6 653 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 ANKHQ9HCJ1 492 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 C1orf109Q9NX04 203 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 RAPGEFL1Q9UHV5 662 aa9.08□□□□□ -0.96
GGA3-223ENST00000621870 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 TRIM38O00635 465 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 KMOO15229 486 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 SOCS5O75159 536 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ENTPD5O75356 428 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 PDE9AO76083 593 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 MYL12AP19105 171 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 IGFALSP35858 605 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 AP1S2P56377 157 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 RAB8AP61006 207 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 MRPS35P82673 323 aaKnown RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 RALGDSQ12967 914 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 TAF13Q15543 124 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ZBTB6Q15916 424 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 PTCHD3Q3KNS1 767 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 INAVAQ3KP66 663 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 RFTN2Q52LD8 501 aaPredicted RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 ZC3HC1Q86WB0 502 aaKnown RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 NXPE1Q8N323 547 aa9.07□□□□□ -0.96
GGA3-223ENST00000621870 ZNF641Q96N77 438 aaPredicted RBP9.07□□□□□ -0.96
GGA3-223ENST00000621870 EFCAB11Q9BUY7 163 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms