RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 GSTM4Q03013 218 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 METTL2BQ6P1Q9 378 aaKnown RBP20.99■□□□□ 0.95
SPAST-204ENST00000621856 CRTC3Q6UUV7 619 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 DCBLD1Q8N8Z6 715 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 KLK6Q92876 244 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 COX14Q96I36 57 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 LRCH3Q96II8 777 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 C3orf30Q96M34 536 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 CDK15Q96Q40 435 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 ZNF385DQ9H6B1 395 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 ZFR2Q9UPR6 939 aaKnown RBP20.99■□□□□ 0.95
SPAST-204ENST00000621856 TMEM98Q9Y2Y6 226 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 PTGDR2Q9Y5Y4 395 aa20.99■□□□□ 0.95
SPAST-204ENST00000621856 UBDO15205 165 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 SLC22A2O15244 555 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 PLRG1O43660 514 aaKnown RBP20.98■□□□□ 0.95
SPAST-204ENST00000621856 LILRB5O75023 590 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 STK16O75716 305 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 GLULP15104 373 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 EZRP15311 586 aaKnown RBP20.98■□□□□ 0.95
SPAST-204ENST00000621856 RGS19P49795 217 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 MNAT1P51948 309 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 ERVPABLB-1P60509 514 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 CDC16Q13042 620 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 SGCGQ13326 291 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 CFAP206Q8IYR0 622 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 CDYL2Q8N8U2 506 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 RPLP0P6Q8NHW5 317 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 FAM3CQ92520 227 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 SIPA1Q96FS4 1042 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 MIPEPQ99797 713 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 PFDN4Q9NQP4 134 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 TAS2R1Q9NYW7 299 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 SCML1Q9UN30 329 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 COPG1Q9Y678 874 aaKnown RBP20.98■□□□□ 0.95
SPAST-204ENST00000621856 MYO10Q9HD67 2058 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 LIN7AO14910 233 aaPredicted RBP20.98■□□□□ 0.95
SPAST-204ENST00000621856 RNGTTO60942 597 aaKnown RBP20.98■□□□□ 0.95
SPAST-204ENST00000621856 KATNA1O75449 491 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 MATN4O95460 622 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 LINC00032P0C843 101 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 COX4I1P13073 169 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 ADSLP30566 484 aaPredicted RBP20.98■□□□□ 0.95
SPAST-204ENST00000621856 PIK3CGP48736 1102 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 AP1S2P56377 157 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 ELF3P78545 371 aaPredicted RBP20.98■□□□□ 0.95
SPAST-204ENST00000621856 CDK3Q00526 305 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 AGERQ15109 404 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 IRF4Q15306 451 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 EOGTQ5NDL2 527 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 KIAA1161Q6NSJ0 714 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 LETMD1Q6P1Q0 360 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 CHSY3Q70JA7 882 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 LARP4Q71RC2 724 aaKnown RBP eCLIP20.98■□□□□ 0.95
SPAST-204ENST00000621856 SLC22A15Q8IZD6 547 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 OR4F6Q8NGB9 312 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 MSANTD3Q96H12 275 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 FOPNLQ96NB1 174 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 OSBPL6Q9BZF3 934 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 TUBB1Q9H4B7 451 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 AKTIPQ9H8T0 292 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 GPR34Q9UPC5 381 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 NCKAP1Q9Y2A7 1128 aa20.98■□□□□ 0.95
SPAST-204ENST00000621856 XIRP2A4UGR9 3374 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 ZFC3H1O60293 1989 aaKnown RBP20.97■□□□□ 0.95
SPAST-204ENST00000621856 LOC100653049A0A140TA62 436 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 A0A1W2PQU0 124 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 H3BM21 787 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 POP7O75817 140 aaKnown RBP20.97■□□□□ 0.95
SPAST-204ENST00000621856 KRT34O76011 436 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 PAK4O96013 591 aaPredicted RBP20.97■□□□□ 0.95
SPAST-204ENST00000621856 CATP04040 527 aaKnown RBP20.97■□□□□ 0.95
SPAST-204ENST00000621856 EPB42P16452 691 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 MAPK9P45984 424 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 HNMTP50135 292 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 PLA2G4EQ3MJ16 856 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 FBXO43Q4G163 708 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 TTC23LQ6PF05 361 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 MILR1Q7Z6M3 343 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 METTL6Q8TCB7 284 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 UTP4Q969X6 686 aaKnown RBP20.97■□□□□ 0.95
SPAST-204ENST00000621856 MCUR1Q96AQ8 359 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 FAM131CQ96AQ9 280 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 TUBGCP3Q96CW5 907 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 CADM1Q9BY67 442 aaKnown RBP20.97■□□□□ 0.95
SPAST-204ENST00000621856 MBNL1Q9NR56 388 aaKnown RBP20.97■□□□□ 0.95
SPAST-204ENST00000621856 KLC4Q9NSK0 619 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 MRGBPQ9NV56 204 aa20.97■□□□□ 0.95
SPAST-204ENST00000621856 MEI4A8MW99 385 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 VPS4BO75351 444 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 PSIP1O75475 530 aaKnown RBP20.96■□□□□ 0.95
SPAST-204ENST00000621856 RASSF9O75901 435 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 ACADMP11310 421 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 PDHA2P29803 388 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 ADPRHP54922 357 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 TRAF3Q13114 568 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 FGL2Q14314 439 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 SQLEQ14534 574 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 FBXW10Q5XX13 1052 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 KIAA1324Q6UXG2 1013 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms