RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 OR2T11Q8NH01 316 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF558Q96NG5 402 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 SLC2A13Q96QE2 648 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 PTPN18Q99952 460 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 ARHGAP39Q9C0H5 1083 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 ELOVL6Q9H5J4 265 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 RNF186Q9NXI6 227 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 LEF1Q9UJU2 399 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CDH9Q9ULB4 789 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 GPR45Q9Y5Y3 372 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 LOC100506127A0A0U1RQW1 187 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 GNG14A0A1W2PPG7 69 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CARNS1A5YM72 827 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 NPEPPSL1A6NEC2 478 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 IQCF5A8MTL0 148 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 MATN3O15232 486 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 GPR39O43194 453 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 NTRK1P04629 796 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 EPB42P16452 691 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 SLC11A2P49281 568 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CDKN1CP49918 316 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 GP2P55259 537 aaKnown RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CYP4F2P78329 520 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 CYP4F3Q08477 520 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 GRSF1Q12849 480 aaKnown RBP eCLIP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 PTPRRQ15256 657 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 NKG7Q16617 165 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 PHKG1Q16816 387 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 UBE2UQ5VVX9 321 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 SLC16A12Q6ZSM3 486 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 ANKRD46Q86W74 232 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 GATAD2AQ86YP4 633 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 GPR152Q8TDT2 470 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 PSMG2Q969U7 264 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 PPP1R2P1Q96PQ5 205 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 MROQ9BYG7 248 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 TMEM245Q9H330 911 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 POLR3BQ9NW08 1133 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 SH3BP4Q9P0V3 963 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 EIF2B4Q9UI10 523 aaKnown RBP6.85□□□□□ -1.31
NEDD9-216ENST00000620854 IKZF3Q9UKT9 509 aa6.85□□□□□ -1.31
NEDD9-216ENST00000620854 FER1L6Q2WGJ9 1857 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 LOC100130705A0A1B0GUX0 176 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 SNPHO15079 494 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 CD3EAPO15446 510 aaKnown RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 SEC22BO75396 215 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 PGLSO95336 258 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 ANGPTL1O95841 491 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 ALOX12P18054 663 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 CCNCP24863 283 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 WEE1P30291 646 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 BRCC3P46736 316 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 LEPRP48357 1165 aaKnown RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TUFMP49411 452 aaKnown RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 CLCNKBP51801 687 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 EPHB3P54753 998 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 COPZ1P61923 177 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 EPS8Q12929 822 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 CSTF3Q12996 717 aaKnown RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 PRKG2Q13237 762 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 RAPSNQ13702 412 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 SEMA3AQ14563 771 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 IHHQ14623 411 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 GTDC1Q4AE62 458 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 MARCH8Q5T0T0 291 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TTC23Q5W5X9 447 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 HACD2Q6Y1H2 254 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 SPATC1Q76KD6 591 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TMEM179BQ7Z7N9 219 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 SYVN1Q86TM6 617 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 ANKRD13BQ86YJ7 626 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF540Q8NDQ6 660 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 DBF4BQ8NFT6 615 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 PROKR1Q8TCW9 393 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 ZNF296Q8WUU4 475 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TPD52L3Q96J77 140 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 NSMCE3Q96MG7 304 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 FOPNLQ96NB1 174 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TRMOQ9BU70 441 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TEX12Q9BXU0 123 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 LRRC3Q9BY71 257 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TPK1Q9H3S4 243 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 AGO3Q9H9G7 860 aaKnown RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 CAPN10Q9HC96 672 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 BPIFA1Q9NP55 256 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 TAS2R13Q9NYV9 303 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 VAPAQ9P0L0 249 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 BOLA1Q9Y3E2 137 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 PTCH2Q9Y6C5 1203 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 NINQ8N4C6 2090 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 CCDC162PA2VCL2 907 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 PRR23AA6NEV1 266 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 SLC1A7O00341 560 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 CPNE6O95741 557 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 STAU1O95793 577 aaKnown RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 ANXA6P08133 673 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 PFKLP17858 780 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 PBLDP30039 288 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-216ENST00000620854 RFX3P48380 749 aa6.84□□□□□ -1.31
NEDD9-216ENST00000620854 HTR6P50406 440 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms