RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 OR6Q1Q8NGQ2 317 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 CORO1BQ9BR76 489 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 PCDH12Q9NPG4 1184 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 ABI2Q9NYB9 513 aaPredicted RBP19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 NUDT4Q9NZJ9 180 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 ERVK-18Q9QC07 812 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 INVSQ9Y283 1065 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 CCL27Q9Y4X3 112 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 M0R3G1 203 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 TBX18O95935 607 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 CTSHP09668 335 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 ZNF865P0CJ78 1059 aaPredicted RBP19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 ITGAMP11215 1152 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 CD9P21926 228 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 PSMA3P25788 255 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 NRIP1P48552 1158 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 YBEYP58557 167 aaPredicted RBP19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 TAF1AQ15573 450 aaPredicted RBP19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 ZC3H12BQ5HYM0 836 aaKnown RBP19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 PAGE2BQ5JRK9 111 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 LDLRAD1Q5T700 205 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 GPR149Q86SP6 731 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 SUSD3Q96L08 255 aa19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 DCAF13Q9NV06 445 aaKnown RBP19.23■□□□□ 0.67
PDLIM3-212ENST00000620787 E2F6O75461 281 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 ANGPTL1O95841 491 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 GSTT2P0CG29 244 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 GSTT2BP0CG30 244 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 MAP2K4P45985 399 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 LSM3P62310 102 aaKnown RBP19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 RPL38P63173 70 aaKnown RBP19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 IL5RAQ01344 420 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 PCBP2Q15366 365 aaKnown RBP eCLIP19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 DGUOKQ16854 277 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 FAM174BQ3ZCQ3 159 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 PLEKHG7Q6ZR37 379 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 MICU2Q8IYU8 434 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 ARL10Q8N8L6 244 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 SCAIQ8N9R8 606 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 DYNC2LI1Q8TCX1 351 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 RORBQ92753 470 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 HPS1Q92902 700 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 GLMNQ92990 594 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 ITCHQ96J02 903 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 ZNF300Q96RE9 604 aaPredicted RBP19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 KATNAL1Q9BW62 490 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 MAGIXQ9H6Y5 334 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 PCDHGA10Q9Y5H3 936 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 PRMT5O14744 637 aaPredicted RBP19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 RETP07949 1114 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 VBP1P61758 197 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 DDR2Q16832 855 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 RFX4Q33E94 735 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 CCDC92Q53HC0 331 aaPredicted RBP19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 RUNDC3AQ59EK9 446 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 TMEM236Q5W0B7 351 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 DNAJC14Q6Y2X3 702 aaPredicted RBP19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 B3GNT8Q7Z7M8 397 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 DSG4Q86SJ6 1040 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 SLC10A4Q96EP9 437 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 REXO5Q96IC2 774 aaKnown RBP19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 MGME1Q9BQP7 344 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 U3KQV3 271 aa19.22■□□□□ 0.67
PDLIM3-212ENST00000620787 MITFO75030 526 aaPredicted RBP19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 HMBSP08397 361 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 SLC2A4P14672 509 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 AKT1P31749 480 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 RGRP47804 291 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 TRAF3Q13114 568 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 GTF2H2Q13888 395 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 TRIP4Q15650 581 aaPredicted RBP19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 MAPKAPK3Q16644 382 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 PGS1Q32NB8 556 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 LAIR1Q6GTX8 287 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 GTF2H2CQ6P1K8 395 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 MIB1Q86YT6 1006 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 KLHDC9Q8NEP7 349 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 NLGN2Q8NFZ4 835 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 PHF10Q8WUB8 498 aaKnown RBP19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 RMDN1Q96DB5 314 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 MS4A4AQ96JQ5 239 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 ZBTB18Q99592 522 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 SCUBE2Q9NQ36 999 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 VNN3Q9NY84 501 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 FLRT1Q9NZU1 646 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 FKBPLQ9UIM3 349 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 VPS9D1Q9Y2B5 631 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 SLC45A1Q9Y2W3 748 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 CREG1O75629 220 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 FTH1P02794 183 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 TYMPP19971 482 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 FMO3P31513 532 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 MAPKAPK2P49137 400 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 TUSC3Q13454 348 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 HIST2H2ACQ16777 129 aaPredicted RBP19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 GTDC1Q4AE62 458 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 ADCK1Q86TW2 530 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 P2RY8Q86VZ1 359 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 PPP3R2Q96LZ3 170 aa19.21■□□□□ 0.67
PDLIM3-212ENST00000620787 SLX1AQ9BQ83 275 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms