RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 TMEM159Q96B96 161 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 SH3KBP1Q96B97 665 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 PRR11Q96HE9 360 aaPredicted RBP10.52□□□□□ -0.73
TARDBP-223ENST00000620632 CCDC74BQ96LY2 380 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 PANX3Q96QZ0 392 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 FERD3LQ96RJ6 166 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 NDNQ99608 321 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 AARSD1Q9BTE6 412 aaKnown RBP10.52□□□□□ -0.73
TARDBP-223ENST00000620632 HGH1Q9BTY7 390 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.52□□□□□ -0.73
TARDBP-223ENST00000620632 PHACTR1Q9C0D0 580 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 KIR3DX1Q9H7L2 352 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 PPANQ9NQ55 473 aaKnown RBP10.52□□□□□ -0.73
TARDBP-223ENST00000620632 SLC24A2Q9UI40 661 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 TSR3Q9UJK0 312 aaKnown RBP10.52□□□□□ -0.73
TARDBP-223ENST00000620632 CEP295Q9C0D2 2601 aa10.52□□□□□ -0.73
TARDBP-223ENST00000620632 PCM1Q15154 2024 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 TCRBV9S1A1TA0A576 114 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 KRT87PA6NCN2 255 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 ESPNB1AK53 854 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 DUX1O43812 170 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 UBXN7O94888 489 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 MPOP05164 745 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 PROS1P07225 676 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 HGFP14210 728 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 CCKBRP32239 447 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 MAGEA4P43358 317 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 LIMK2P53671 638 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 INHBCP55103 352 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 CDKN2DP55273 166 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 MGAT5Q09328 741 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 PRKG2Q13237 762 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 CUL1Q13616 776 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 C16orf72Q14CZ0 275 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 GLE1Q53GS7 698 aaKnown RBP10.51□□□□□ -0.73
TARDBP-223ENST00000620632 ACSBG2Q5FVE4 666 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 C3orf38Q5JPI3 329 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 OTOAQ7RTW8 1153 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 GALNT7Q86SF2 657 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 PIM3Q86V86 326 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 RBM12BQ8IXT5 1001 aaKnown RBP10.51□□□□□ -0.73
TARDBP-223ENST00000620632 SIDT2Q8NBJ9 832 aaKnown RBP10.51□□□□□ -0.73
TARDBP-223ENST00000620632 ACVR1CQ8NER5 493 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 OR4D9Q8NGE8 314 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 OR52E1Q8NGJ3 308 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 CD200R1Q8TD46 325 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 ASZ1Q8WWH4 475 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 NCSTNQ92542 709 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 AHCYL2Q96HN2 611 aaKnown RBP10.51□□□□□ -0.73
TARDBP-223ENST00000620632 GPR21Q99679 349 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 MCMBPQ9BTE3 642 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 TSSK1BQ9BXA7 367 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 LRRC4CQ9HCJ2 640 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 LATS2Q9NRM7 1088 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 FAM114A2Q9NRY5 505 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 PDP2Q9P2J9 529 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 SATB2Q9UPW6 733 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 NFS1Q9Y697 457 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 MN1Q10571 1320 aaPredicted RBP10.51□□□□□ -0.73
TARDBP-223ENST00000620632 CHD8Q9HCK8 2581 aa10.51□□□□□ -0.73
TARDBP-223ENST00000620632 ZFHX4Q86UP3 3567 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 H3BMM5 538 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 IFRD1O00458 451 aaPredicted RBP10.5□□□□□ -0.73
TARDBP-223ENST00000620632 PFDN6O15212 129 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 KIF1CO43896 1103 aaKnown RBP10.5□□□□□ -0.73
TARDBP-223ENST00000620632 C9P02748 559 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 APOA4P06727 396 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 RHOXF2BP0C7M4 288 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 AMD1P17707 334 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 CHRM3P20309 590 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 ETV5P41161 510 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 CAPZBP47756 277 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 ABRQ12979 859 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 GRB7Q14451 532 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 RTP5Q14D33 572 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 EFTUD2Q15029 972 aaKnown RBP eCLIP10.5□□□□□ -0.73
TARDBP-223ENST00000620632 PLCL1Q15111 1095 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 CCSMST1Q4G0I0 132 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 SNAP47Q5SQN1 464 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 PLEKHS1Q5SXH7 462 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 PHF19Q5T6S3 580 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 TMEM71Q6P5X7 295 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 WDR74Q6RFH5 385 aaPredicted RBP10.5□□□□□ -0.73
TARDBP-223ENST00000620632 UNQ6494/PRO21346Q6UXR6 183 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 KIAA0408Q6ZU52 694 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 PALM2Q8IXS6 379 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 ZBTB2Q8N680 514 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 LMNTD1Q8N9Z9 388 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 OR5K2Q8NHB8 316 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 MDM1Q8TC05 714 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 IFT81Q8WYA0 676 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 KCNJ9Q92806 393 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 LIN37Q96GY3 246 aaPredicted RBP10.5□□□□□ -0.73
TARDBP-223ENST00000620632 PPM1MQ96MI6 270 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 TMEM74Q96NL1 305 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 TGM7Q96PF1 710 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 OLFM1Q99784 485 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 RHOXF2Q9BQY4 288 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 MENTQ9BUN1 341 aa10.5□□□□□ -0.73
TARDBP-223ENST00000620632 XKR8Q9H6D3 395 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms