RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CPSF2Q9P2I0 782 aaKnown RBP7.85□□□□□ -1.15
CPNE3-209ENST00000620393 XPR1Q9UBH6 696 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 FAM8A1Q9UBU6 413 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 SUSD2Q9UGT4 822 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 KLF15Q9UIH9 416 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 IKZF3Q9UKT9 509 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 ST14Q9Y5Y6 855 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 MUC3AQ02505 3323 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 A0A1B0GVT2 93 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 SYCE1LA8MT33 242 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 G3V2L1 256 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 SCAMP1O15126 338 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 POLR3GO15318 223 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 BIRC5O15392 142 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 KERAO60938 352 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 PSIP1O75475 530 aaKnown RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 BPGMP07738 259 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 TPBGLP0DKB5 382 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 MTHFD2P13995 350 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 CTSEP14091 401 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 NME1P15531 152 aaKnown RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 TAC1P20366 129 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 AK4P27144 223 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 HOXD12P35452 270 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 MDH1P40925 334 aaKnown RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 CTSKP43235 329 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 MAPK9P45984 424 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 SERPINB4P48594 390 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 IL9RQ01113 521 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 DUOXA1Q1HG43 343 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 KIF19Q2TAC6 998 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 CDKL4Q5MAI5 379 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 PEAR1Q5VY43 1037 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 SBSNQ6UWP8 590 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 ABRAXAS1Q6UWZ7 409 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 LAYNQ6UX15 382 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 ZYG11AQ6WRX3 759 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 UBE2R2Q712K3 238 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 ADAMTSL2Q86TH1 951 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 NRROSQ86YC3 692 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 NUDCD3Q8IVD9 361 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 PHACTR4Q8IZ21 702 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 CCDC63Q8NA47 563 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 CFAP61Q8NHU2 1237 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 CCL4L1Q8NHW4 92 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 CEP76Q8TAP6 659 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 MCOLN3Q8TDD5 553 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 SKA2Q8WVK7 121 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 TFGQ92734 400 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 DLG3Q92796 817 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 LOXL4Q96JB6 756 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 FOPNLQ96NB1 174 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 PAIP2Q9BPZ3 127 aaKnown RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 GSDMCQ9BYG8 508 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 TRIM54Q9BYV2 358 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 ZDHHC5Q9C0B5 715 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 TCEAL2Q9H3H9 227 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-209ENST00000620393 RDH14Q9HBH5 336 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 PARVBQ9HBI1 364 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 MLXIPLQ9NP71 852 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 DNAJC28Q9NX36 388 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 COPG2Q9UBF2 871 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 MID2Q9UJV3 735 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 ADAMTS6Q9UKP5 1117 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 PCOLCE2Q9UKZ9 415 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 RNF112Q9ULX5 631 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 TMCO1Q9UM00 188 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 KCNK6Q9Y257 313 aa7.84□□□□□ -1.15
CPNE3-209ENST00000620393 ABCA7Q8IZY2 2146 aa7.84□□□□□ -1.16
CPNE3-209ENST00000620393 PLXNA2O75051 1894 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 GON4LQ3T8J9 2241 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 SCN8AQ9UQD0 1980 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 WDR91A4D1P6 747 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 NPEPPSL1A6NEC2 478 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 IFRD1O00458 451 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 KLK8O60259 260 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 DLX3O60479 287 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 SNX2O60749 519 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 TRIM13O60858 407 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 SMIM24O75264 130 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 C1orf105O95561 183 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 CATP04040 527 aaKnown RBP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 ENO2P09104 434 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 HIST1H2AGP0C0S8 130 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 MYL2P10916 166 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 HIST1H2ADP20671 130 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 ATP5F1P24539 256 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 RPL10P27635 214 aaKnown RBP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 MAP4P27816 1152 aaKnown RBP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 ALDH3A1P30838 453 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 ACTR1BP42025 376 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 RXRGP48443 463 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 RPIAP49247 311 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 PRKAA2P54646 552 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 GYS2P54840 703 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 DNAJB13P59910 316 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 ACTR1AP61163 376 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 HNRNPKP61978 463 aaKnown RBP eCLIP7.83□□□□□ -1.16
CPNE3-209ENST00000620393 CDKL1Q00532 357 aa7.83□□□□□ -1.16
CPNE3-209ENST00000620393 BNC1Q01954 994 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms