RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 LIN7AO14910 233 aaPredicted RBP15.58■□□□□ 0.08
BRCA1-228ENST00000618469 CD3EAPO15446 510 aaKnown RBP15.58■□□□□ 0.08
BRCA1-228ENST00000618469 EFSO43281 561 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 LIPCP11150 499 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 ITGB6P18564 788 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 ARNTP27540 789 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 NDUFS1P28331 727 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 PDHA2P29803 388 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 TSPAN7P41732 249 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 TTPAP49638 278 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 SEPHS1P49903 392 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 RPA4Q13156 261 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 BRD3Q15059 726 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 LINC00303Q3SY05 128 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 KLHL35Q6PF15 583 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 NAPRTQ6XQN6 538 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 OOSP2Q86WS3 158 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 ZFAND4Q86XD8 727 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 BMPERQ8N8U9 685 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 MCUQ8NE86 351 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 LKAAEAR1Q8TD35 194 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 EXTL1Q92935 676 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 TAAR9Q96RI9 348 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 TRIM56Q9BRZ2 755 aaKnown RBP15.58■□□□□ 0.08
BRCA1-228ENST00000618469 HGH1Q9BTY7 390 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 B3GALT1Q9Y5Z6 326 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 COLEC10Q9Y6Z7 277 aa15.58■□□□□ 0.08
BRCA1-228ENST00000618469 OR5K3A6NET4 321 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 GOLGA8KD6RF30 607 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 GOLGA8TH3BQL2 631 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 FANCGO15287 622 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 KIF1CO43896 1103 aaKnown RBP15.57■□□□□ 0.08
BRCA1-228ENST00000618469 VAPBO95292 243 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 MLNP12872 115 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 CSE1LP55060 971 aaKnown RBP15.57■□□□□ 0.08
BRCA1-228ENST00000618469 RAB15P59190 212 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 PTK6Q13882 451 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 TGIF1Q15583 401 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 CACHD1Q5VU97 1274 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 ANKS6Q68DC2 871 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 KIAA0930Q6ICG6 404 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-228ENST00000618469 PRSS42Q7Z5A4 293 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 KLHL7Q8IXQ5 586 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 PPIL6Q8IXY8 311 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 C17orf53Q8N3J3 647 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-228ENST00000618469 NAT8LQ8N9F0 302 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 ACVR1CQ8NER5 493 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 ZNF669Q96BR6 464 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-228ENST00000618469 ZDHHC12Q96GR4 267 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 FERD3LQ96RJ6 166 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 CTRCQ99895 268 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 DDA1Q9BW61 102 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 TSSK1BQ9BXA7 367 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 ZNF768Q9H5H4 540 aaKnown RBP15.57■□□□□ 0.08
BRCA1-228ENST00000618469 PCDHGA3Q9Y5H0 932 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 SDK2Q58EX2 2172 aa15.57■□□□□ 0.08
BRCA1-228ENST00000618469 UBA6A0AVT1 1052 aaPredicted RBP15.56■□□□□ 0.08
BRCA1-228ENST00000618469 PRMT5O14744 637 aaPredicted RBP15.56■□□□□ 0.08
BRCA1-228ENST00000618469 TOX3O15405 576 aaPredicted RBP15.56■□□□□ 0.08
BRCA1-228ENST00000618469 NDUFS3O75489 264 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 PAMP19021 973 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 CD82P27701 267 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 ARCN1P48444 511 aaKnown RBP15.56■□□□□ 0.08
BRCA1-228ENST00000618469 CD151P48509 253 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 DNTTIP2Q5QJE6 756 aaKnown RBP15.56■□□□□ 0.08
BRCA1-228ENST00000618469 DCAF12Q5T6F0 453 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 RNASEH2BQ5TBB1 312 aaKnown RBP15.56■□□□□ 0.08
BRCA1-228ENST00000618469 MRNIPQ6NTE8 343 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 ARMC6Q6NXE6 501 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 CREG2Q8IUH2 290 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 ZFPM2Q8WW38 1151 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 SLCO2A1Q92959 643 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 B3GNT4Q9C0J1 378 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 RAB33BQ9H082 229 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 SIDT1Q9NXL6 827 aaKnown RBP15.56■□□□□ 0.08
BRCA1-228ENST00000618469 IL1RAPL1Q9NZN1 696 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 EPHA6Q9UF33 1036 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 PCYOX1Q9UHG3 505 aa15.56■□□□□ 0.08
BRCA1-228ENST00000618469 SLC5A10A0PJK1 596 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 OR6C74A6NCV1 312 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 SDR42E2A6NKP2 422 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 IQCF5A8MTL0 148 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 STMND1H3BQB6 276 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 DNALI1O14645 258 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-228ENST00000618469 FAM87AP0C7U9 286 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 EIF3BP55884 814 aaKnown RBP15.55■□□□□ 0.08
BRCA1-228ENST00000618469 MC2RQ01718 297 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 FOXM1Q08050 763 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 DHX34Q14147 1143 aaKnown RBP15.55■□□□□ 0.08
BRCA1-228ENST00000618469 IZUMO3Q5VZ72 239 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 ARMC3Q5W041 872 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 PTRHD1Q6GMV3 140 aaKnown RBP15.55■□□□□ 0.08
BRCA1-228ENST00000618469 KRT222Q8N1A0 295 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 PHC3Q8NDX5 983 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 OR4E2Q8NGC2 313 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 OR52E1Q8NGJ3 308 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 LCN9Q8WX39 176 aa15.55■□□□□ 0.08
BRCA1-228ENST00000618469 TFGQ92734 400 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-228ENST00000618469 CCNL2Q96S94 520 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms