RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	ZNF541	Q9H0D2	1346 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	AGPS	O00116	658 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	C4BPA	P04003	597 aa	Known RBP	7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	SLC7A1	P30825	629 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	LINC00471	Q8N535	108 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	CNTD1	Q8N815	330 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	KLHL6	Q8WZ60	621 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	AGAP2	Q99490	1192 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	RNPEPL1	Q9HAU8	725 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	SSU72	Q9NP77	194 aa	Known RBP	7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	POLR3B	Q9NW08	1133 aa	Predicted RBP	7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	SIRPG	Q9P1W8	387 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	STXBP5L	Q9Y2K9	1186 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	ADAMTS3	O15072	1205 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	LYPLA1	O75608	230 aa	Predicted RBP	7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	ARRB1	P49407	418 aa	Predicted RBP	7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	TAS2R40	P59535	323 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	HSPB3	Q12988	150 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	TIGD2	Q4W5G0	525 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	PHF19	Q5T6S3	580 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	GLYAT	Q6IB77	296 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	CXorf57	Q6NSI4	855 aa	Known RBP	7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	RFWD3	Q6PCD5	774 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	BRAT1	Q6PJG6	821 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	GDPD4	Q6W3E5	623 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	TAC4	Q86UU9	113 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	CERS5	Q8N5B7	392 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	OR2L3	Q8NG85	312 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	UFD1	Q92890	307 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	TMEM125	Q96AQ2	219 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	RGMA	Q96B86	450 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	NXPE2	Q96DL1	559 aa		7.26	□□□□□ -1.25
PCDH15-231	ENST00000617271	TRBV23OR9-2	A0A075B6M9	112 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271		B4DGG1	531 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ZNF30	P17039	623 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	NCBP2	P52298	156 aa	Known RBP eCLIP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	MTTP	P55157	894 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ELF3	P78545	371 aa	Predicted RBP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	PDCD4	Q53EL6	469 aa	Known RBP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	TMEM63B	Q5T3F8	832 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ENPP7	Q6UWV6	458 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ZZZ3	Q8IYH5	903 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ZMIZ2	Q8NF64	920 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	OR4K17	Q8NGC6	315 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	SLC44A1	Q8WWI5	657 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	TSSK3	Q96PN8	268 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	LDAH	Q9H6V9	325 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	PAK6	Q9NQU5	681 aa	Predicted RBP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	TRMT13	Q9NUP7	481 aa	Known RBP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	CLCA3P	Q9Y6N3	262 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	TEX13C	A0A0J9YWL9	993 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	SAGE2P	A6NJ88	616 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	PLOD3	O60568	738 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ITGA10	O75578	1167 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	FADS2	O95864	444 aa	Known RBP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	SPATA31C1	P0DKV0	1188 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	TSPAN8	P19075	237 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	HSD11B1	P28845	292 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	RPL5	P46777	297 aa	Known RBP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	PGD	P52209	483 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	C1QTNF8	P60827	252 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	CYP4F8	P98187	520 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	DLG2	Q15700	870 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	SLC8B1	Q6J4K2	584 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	PLA2G15	Q8NCC3	412 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	DNAJA4	Q8WW22	397 aa	Predicted RBP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	SDCBP2	Q9H190	292 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ABCG8	Q9H221	673 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	CERS4	Q9HA82	394 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	NMUR1	Q9HB89	426 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	FBXW11	Q9UKB1	542 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	LRRC10B	A6NIK2	292 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	FFAR2	O15552	330 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	NME6	O75414	186 aa	Predicted RBP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	PSIP1	O75475	530 aa	Known RBP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	SCGN	O76038	276 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ZNF432	O94892	652 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	GPI	P06744	558 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	CYP4B1	P13584	511 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ZNF3	P17036	446 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	GDI1	P31150	447 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	CSK	P41240	450 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	LIMK2	P53671	638 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	MAPK10	P53779	464 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ACTR1A	P61163	376 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ECT2L	Q008S8	904 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	CRHR2	Q13324	411 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	SPIN4	Q56A73	249 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	LRIF1	Q5T3J3	769 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	MON1B	Q7L1V2	547 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	LRRTM4	Q86VH4	590 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	SLC22A15	Q8IZD6	547 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	C2orf73	Q8N5S3	287 aa	Predicted RBP	7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	HMGB4	Q8WW32	186 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	PMEPA1	Q969W9	287 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	C1GALT1C1	Q96EU7	318 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	TCF7L1	Q9HCS4	588 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ABCB8	Q9NUT2	735 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	ZDHHC3	Q9NYG2	299 aa		7.25	□□□□□ -1.25
PCDH15-231	ENST00000617271	NPIPA5	E9PKD4	350 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms