RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 NT5C3BQ969T7 300 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 CDK5RAP1Q96SZ6 601 aaKnown RBP12.95□□□□□ -0.34
MSH6-214ENST00000616033 SEMA3CQ99985 751 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 UGT2B28Q9BY64 529 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 SNX6Q9UNH7 406 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 A0A096LPI6 279 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 ILVBLA1L0T0 632 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 OR1I1O60431 355 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 MLYCDO95822 493 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 JUNBP17275 347 aaPredicted RBP12.95□□□□□ -0.34
MSH6-214ENST00000616033 C21orf33P30042 268 aaPredicted RBP12.95□□□□□ -0.34
MSH6-214ENST00000616033 S100A5P33763 92 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 CASP9P55211 416 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 EEFSECP57772 596 aaKnown RBP12.95□□□□□ -0.34
MSH6-214ENST00000616033 ISL1P61371 349 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 STK11Q15831 433 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 MAPKAPK3Q16644 382 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 TRIM60Q495X7 471 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 PXDC1Q5TGL8 231 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 RGMBQ6NW40 437 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 CADM2Q8N3J6 435 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 STAG3L4Q8TBR4 150 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 HMCESQ96FZ2 354 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 PRKD2Q9BZL6 878 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 EXOSC4Q9NPD3 245 aaKnown RBP12.95□□□□□ -0.34
MSH6-214ENST00000616033 PIRO00625 290 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 CHRM5P08912 532 aaPredicted RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 EDNRBP24530 442 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 AQP1P29972 269 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 BMPR1AP36894 532 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 LAIR1Q6GTX8 287 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 CYP20A1Q6UW02 462 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 GPRIN3Q6ZVF9 776 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 MMAAQ8IVH4 418 aaKnown RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 Q96MT0 163 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 RBM4BQ9BQ04 359 aaKnown RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 RBM4Q9BWF3 364 aaKnown RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 RMND5AQ9H871 391 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 PLSCR3Q9NRY6 295 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 DNAJB9Q9UBS3 223 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 ZNF225Q9UK10 706 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 EIF3LQ9Y262 564 aaKnown RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 DNMT3AQ9Y6K1 912 aaPredicted RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 NRCAMQ92823 1304 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 E5RI56 91 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 CXCR6O00574 342 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 AIREO43918 545 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 OR4Q2P0C623 313 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 DCTP40126 519 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 EMX2Q04743 252 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 IHHQ14623 411 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 DCAF4L1Q3SXM0 396 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 SPANXN4Q5MJ08 99 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 B3GNT8Q7Z7M8 397 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 CYP4Z1Q86W10 505 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 LYSMD2Q8IV50 215 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 LEMD2Q8NC56 503 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 C7orf57Q8NEG2 295 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 L3HYPDHQ96EM0 354 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 CEP19Q96LK0 163 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 TMEM209Q96SK2 561 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 SPON2Q9BUD6 331 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 FAM92AA1XBS5 289 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 SLC22A1O15245 554 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 EEDO75530 441 aaKnown RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 VIPP01282 170 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 HTR1EP28566 365 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 IDH2P48735 452 aaKnown RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 ATP4BP51164 291 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 CLCNKBP51801 687 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 TAF12Q16514 161 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 MRNIPQ6NTE8 343 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 RIMKLAQ8IXN7 391 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 TP53I13Q8NBR0 393 aaPredicted RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 NTAN1Q96AB6 310 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 FAM120BQ96EK7 910 aaKnown RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 ZNF583Q96ND8 569 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 DEPDC7Q96QD5 511 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 FARSBQ9NSD9 589 aaKnown RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 AFF4Q9UHB7 1163 aaKnown RBP12.94□□□□□ -0.34
MSH6-214ENST00000616033 ANGPTL3Q9Y5C1 460 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 PCDHGA10Q9Y5H3 936 aa12.94□□□□□ -0.34
MSH6-214ENST00000616033 SLC12A8A0AV02 714 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 TTC34A8MYJ7 566 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 F9P00740 461 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 C1QCP02747 245 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 CYP11A1P05108 521 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 FAM187BQ17R55 369 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 CES5AQ6NT32 575 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 DCP2Q8IU60 420 aaKnown RBP12.93□□□□□ -0.34
MSH6-214ENST00000616033 NETO1Q8TDF5 533 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 MYLPFQ96A32 169 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 NACC2Q96BF6 587 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 TPD52L3Q96J77 140 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 EGFL8Q99944 293 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 CATSPERBQ9H7T0 1116 aa12.93□□□□□ -0.34
MSH6-214ENST00000616033 CCDC177Q9NQR7 707 aaPredicted RBP12.93□□□□□ -0.34
MSH6-214ENST00000616033 CATSPERZQ9NTU4 200 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms