RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 TRIM48Q8IWZ4 208 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 OR2L3Q8NG85 312 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 GON7Q9BXV9 100 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 PRKAG2Q9UGJ0 569 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 S100PP25815 95 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 AADACL4Q5VUY2 407 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 OR2T5Q6IEZ7 315 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 BEND5Q7L4P6 421 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 OR2T29Q8NH02 315 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 BARD1Q99728 777 aaKnown RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 SNRNP25Q9BV90 132 aaKnown RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 DPCDQ9BVM2 203 aaPredicted RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 FAIM2Q9BWQ8 316 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 LGR4Q9BXB1 951 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 TP63Q9H3D4 680 aaPredicted RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 TIGARQ9NQ88 270 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 COL20A1Q9P218 1284 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 PEX14O75381 377 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 SLITRK3O94933 977 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 MANFP55145 182 aaKnown RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 E2F1Q01094 437 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 PITRM1Q5JRX3 1037 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 IRF2BP1Q8IU81 584 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 ZYG11BQ9C0D3 744 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 ELL3Q9HB65 397 aaPredicted RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 MKS1Q9NXB0 559 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 GFOD1Q9NXC2 390 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 SPIN1Q9Y657 262 aaPredicted RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 ANKRD63C9JTQ0 380 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 GMPSP49915 693 aaPredicted RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 SLC10A7Q0GE19 358 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 ILF3Q12906 894 aaKnown RBP eCLIP13.56□□□□□ -0.248e-10■■■■■ 33.1
CHD1-212ENST00000614616 PLD1Q13393 1074 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 HJURPQ8NCD3 748 aaPredicted RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 DNAJC19Q96DA6 116 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 TDRD3Q9H7E2 651 aaKnown RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 DDX4Q9NQI0 724 aaKnown RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 TCRBV5S4A2TA0A5A2 114 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 RHOCP08134 193 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 TXNP10599 105 aaKnown RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 CXCR2P25025 360 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 XKP51811 444 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 SEMA5AQ13591 1074 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 FAM98CQ17RN3 349 aaKnown RBP13.56□□□□□ -0.24
CHD1-212ENST00000614616 ALG11Q2TAA5 492 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 BORAQ6PGQ7 559 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 GLIS3Q8NEA6 775 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 CHPT1Q8WUD6 406 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 DCAKDQ8WVC6 231 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 BEX2Q9BXY8 128 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 ZNF304Q9HCX3 659 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 SNCAIPQ9Y6H5 919 aa13.56□□□□□ -0.24
CHD1-212ENST00000614616 MYPNQ86TC9 1320 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 MST1RQ04912 1400 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 PER2O15055 1255 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 ICMTO60725 284 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 COL6A1P12109 1028 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 OPRL1P41146 370 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 BAATQ14032 418 aaPredicted RBP13.55□□□□□ -0.24
CHD1-212ENST00000614616 NFE2Q16621 373 aaPredicted RBP13.55□□□□□ -0.24
CHD1-212ENST00000614616 CYP2A13Q16696 494 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 FAM83AQ86UY5 434 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 OR13J1Q8NGT2 312 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 LGALS12Q96DT0 336 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 SMURF2Q9HAU4 748 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 INMT-MINDY4F8WBC2 141 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 GOT1P17174 413 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 ABRQ12979 859 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 CBFBQ13951 182 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
CHD1-212ENST00000614616 PGAP1Q75T13 922 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 WDSUB1Q8N9V3 476 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 OR10H4Q8NGA5 316 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 OR4L1Q8NH43 312 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 ZNF675Q8TD23 568 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 FATE1Q969F0 183 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 DUSP16Q9BY84 665 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 ZNF70Q9UC06 446 aaPredicted RBP13.55□□□□□ -0.24
CHD1-212ENST00000614616 IRS2Q9Y4H2 1338 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 A0A088AWK7 358 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 H3BMQ9 156 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 HPRP00739 348 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 ANXA8P13928 327 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 ZNF10P21506 573 aaPredicted RBP13.55□□□□□ -0.24
CHD1-212ENST00000614616 MON1BQ7L1V2 547 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 SETD6Q8TBK2 473 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 HEXDCQ8WVB3 486 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 COG8Q96MW5 612 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 GBA3Q9H227 469 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 EIF2B3Q9NR50 452 aaKnown RBP13.55□□□□□ -0.24
CHD1-212ENST00000614616 GADD45AP24522 165 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 PMS2P3Q13401 168 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 NAE1Q13564 534 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 RAP1GAP2Q684P5 730 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 RPLP0P6Q8NHW5 317 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 ADAM32Q8TC27 787 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 TMED9Q9BVK6 235 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 CCDC106Q9BWC9 280 aa13.55□□□□□ -0.24
CHD1-212ENST00000614616 RIMKLBQ9ULI2 386 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms