RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 ARSEP51690 589 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 AIF1P55008 147 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 MAZP56270 477 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 POLR2LP62875 67 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 ENPP2Q13822 863 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 HNRNPDQ14103 355 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 MAP7Q14244 749 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 INSCQ1MX18 579 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 SIRPB2Q5JXA9 342 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 TMEM201Q5SNT2 666 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 AGAP9Q5VTM2 703 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 TAX1BP1Q86VP1 789 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 SLC13A5Q86YT5 568 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CLDN19Q8N6F1 224 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 TEX19Q8NA77 164 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 RCBTB1Q8NDN9 531 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CCHCR1Q8TD31 782 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 SGF29Q96ES7 293 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CHMP6Q96FZ7 201 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 PGM2Q96G03 612 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 ZNF778Q96MU6 729 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 FMO2Q99518 471 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 FERMT1Q9BQL6 677 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 ZFYVE1Q9HBF4 777 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 KLQ9UEF7 1012 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 UTP11Q9Y3A2 253 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 PCYT1BQ9Y5K3 369 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 UBA6A0AVT1 1052 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 OR52A4PA6NMU1 304 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 ANKRD66B4E2M5 251 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 APOC4-APOC2K7ER74 178 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CACNB4O00305 520 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 TRIM38O00635 465 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 NPC1O15118 1278 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 STX7O15400 261 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 APOC2P02655 101 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 JUPP14923 745 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CHN1P15882 459 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 HTR1BP28222 390 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 PEX5P50542 639 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CCT8P50990 548 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 PMS2P54278 862 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 EIF3BP55884 814 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 IFI35P80217 286 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 DR1Q01658 176 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 PPIDQ08752 370 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CCDC15Q0P6D6 951 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 PAFAH1B3Q15102 231 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 C5orf22Q49AR2 442 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 SLC45A4Q5BKX6 768 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 N4BP2L1Q5TBK1 243 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 NAPEPLDQ6IQ20 393 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 C11orf63Q6NUN7 778 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 DUS1LQ6P1R4 473 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 UBE2R2Q712K3 238 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 NAXDQ8IW45 347 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 SDR16C5Q8N3Y7 309 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 TMIEQ8NEW7 156 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 UHMK1Q8TAS1 419 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 ARRDC2Q8TBH0 407 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 OR1E3Q8WZA6 343 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CNDP2Q96KP4 475 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 NUDCD1Q96RS6 583 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 SCNM1Q9BWG6 230 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 TDRD1Q9BXT4 1180 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CARD9Q9H257 536 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CNOT10Q9H9A5 744 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 SLC2A6Q9UGQ3 507 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 SLC12A4Q9UP95 1085 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 PLXNA2O75051 1894 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 FLNBO75369 2602 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 KIAA1549LQ6ZVL6 1849 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 TCRBV7S3A2A0A539 114 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 PMS2P1A4D2B8 440 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 KLHL33A6NCF5 533 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CCT8L1PA6NM43 557 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 GSRP00390 522 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 MPOP05164 745 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 ZFXP17010 805 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 DGKAP23743 735 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CCNCP24863 283 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 CA5AP35218 305 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 MMP12P39900 470 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 RPL21P46778 160 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 HADHBP55084 474 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 AP1S1P61966 158 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 ELF3P78545 371 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 ZBTB16Q05516 673 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 ELP6Q0PNE2 266 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 PRKG2Q13237 762 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 PRPSAP1Q14558 356 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 SNCBQ16143 134 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 GKAP1Q5VSY0 366 aaPredicted RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 SLC9A4Q6AI14 798 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 ESRP1Q6NXG1 681 aaKnown RBP4.89□□□□□ -1.63
SYCP1-209ENST00000613524 TTC27Q6P3X3 843 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 GUSBP11Q6P575 273 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 TLDC1Q6P9B6 456 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 BBS12Q6ZW61 710 aa4.89□□□□□ -1.63
SYCP1-209ENST00000613524 USP30Q70CQ3 517 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms