RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 C12orf4Q9NQ89 552 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 CLEC4AQ9UMR7 237 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 H6PDO95479 791 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 ITIH1P19827 911 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 RPP38P78345 283 aaKnown RBP17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 RPL19P84098 196 aaKnown RBP17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 GPR33Q49SQ1 333 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 ZDHHC21Q8IVQ6 265 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 FCRL5Q96RD9 977 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 DMAC2Q9NW81 257 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 STOX2Q9P2F5 926 aaPredicted RBP17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 WRBO00258 174 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 TLL1O43897 1013 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 EOMESO95936 686 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 AGR2O95994 175 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 CCL23P55773 120 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 FSTL1Q12841 308 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 RBM20Q5T481 1227 aaKnown RBP17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 LBX2Q6XYB7 198 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 TAC4Q86UU9 113 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 MCEMP1Q8IX19 187 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 TP53INP1Q96A56 240 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 TUBGCP5Q96RT8 1024 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 SLC22A1O15245 554 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 FECHP22830 423 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 TM4SF1P30408 202 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 SLC7A1P30825 629 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 MSANTD2Q6P1R3 559 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 ZNF433Q8N7K0 673 aaPredicted RBP17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 ZNF781Q8N8C0 355 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 MAGEE1Q9HCI5 957 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 CNTN3Q9P232 1028 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 AASSQ9UDR5 926 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 RIMBP3CA6NJZ7 1639 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 RIMBP3BA6NNM3 1639 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 RIMBP3Q9UFD9 1639 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 PIP5K1BO14986 540 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 PDPK1O15530 556 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 CD2P06729 351 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 AQP1P29972 269 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 ILF3Q12906 894 aaKnown RBP eCLIP17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 PPM1JQ5JR12 505 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 OR4C6Q8NH72 309 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 EXOSC8Q96B26 276 aaKnown RBP17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 EQTNQ9NQ60 294 aa17.15■□□□□ 0.34
HMGXB3-206ENST00000613459 KCNA5P22460 613 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 ERVK-8P63133 956 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 DPYSL2Q16555 572 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 KCNS3Q9BQ31 491 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 ANKRA2Q9H9E1 313 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 COQ4Q9Y3A0 265 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 EME2A4GXA9 379 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 DUSP11O75319 330 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 SCGNO76038 276 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 CDH1P12830 882 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 GNAZP19086 355 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 ANKRD22Q5VYY1 191 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 ERI1Q8IV48 349 aaKnown RBP17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 OXR1Q8N573 874 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC9A6Q92581 669 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 PIGKQ92643 395 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 HMCESQ96FZ2 354 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 SLC22A4Q9H015 551 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 MED11Q9P086 117 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 FZD1Q9UP38 647 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 MEMO1Q9Y316 297 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 ZFP37Q9Y6Q3 630 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 NFAT5O94916 1531 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 FAM149AA5PLN7 773 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 LRRC72A6NJI9 287 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 OR4F21O95013 312 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 GADD45GO95257 159 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 GJB1P08034 283 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 PTGS2P35354 604 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 KCTD19Q17RG1 926 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 CRY2Q49AN0 593 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 FRRS1Q6ZNA5 592 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 MIPEPQ99797 713 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 LRRC3Q9BY71 257 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 FABP12A6NFH5 140 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 DUXAA6NLW8 204 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 SNAPC5O75971 98 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 MATN4O95460 622 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 NMBRP28336 390 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 HCAR3P49019 387 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 CDH12P55289 794 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 MVKQ03426 396 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 CLEC6AQ6EIG7 209 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 FSTL5Q8N475 847 aaPredicted RBP17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 MFSD3Q96ES6 412 aa17.14■□□□□ 0.33
HMGXB3-206ENST00000613459 PRAMEF12O95522 483 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 HMGN1P05114 100 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 XKR4Q5GH76 650 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 VWA5B1Q5TIE3 1220 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 PCP4L1A6NKN8 68 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 AKT2P31751 481 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 GRK6P43250 576 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 PSMD8P48556 350 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 OR2B6P58173 313 aa17.13■□□□□ 0.33
HMGXB3-206ENST00000613459 USP30Q70CQ3 517 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms