RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	PTPN18	Q99952	460 aa		13.62	□□□□□ -0.23
MUC1-223	ENST00000611571	DNAJB9	Q9UBS3	223 aa		13.62	□□□□□ -0.23
MUC1-223	ENST00000611571	SLC22A14	Q9Y267	594 aa		13.62	□□□□□ -0.23
MUC1-223	ENST00000611571	CPQ	Q9Y646	472 aa		13.62	□□□□□ -0.23
MUC1-223	ENST00000611571	TRBV23OR9-2	A0A075B6M9	112 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	PLOD3	O60568	738 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	KERA	O60938	352 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	GNAO1	P09471	354 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	KCNE1	P15382	129 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	HCAR3	P49019	387 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	PABPC1L	Q4VXU2	614 aa	Known RBP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	USP39	Q53GS9	565 aa	Known RBP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	UNC50	Q53HI1	259 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	C6orf136	Q5SQH8	315 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	LUZP2	Q86TE4	346 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	KBTBD8	Q8NFY9	601 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	RAB2B	Q8WUD1	216 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	ZFAND2B	Q8WV99	257 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	ISOC1	Q96CN7	298 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	KCNC2	Q96PR1	638 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	SERHL2	Q9H4I8	314 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	SERHL	Q9NQF3	203 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	RAD18	Q9NS91	495 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	TLR6	Q9Y2C9	796 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	NUP214	P35658	2090 aa	Predicted RBP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	CHD4	Q14839	1912 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	IGKV6D-21	A0A0A0MT36	114 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	LDB2	O43679	373 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	DUSP11	O75319	330 aa	Known RBP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	OR4D2	P58180	307 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	LSAMP	Q13449	338 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	PIGG	Q5H8A4	983 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	RELT	Q969Z4	430 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	SCLY	Q96I15	445 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	MRPL9	Q9BYD2	267 aa	Known RBP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	KCTD5	Q9NXV2	234 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	STMN3	Q9NZ72	180 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	RNF11	Q9Y3C5	154 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	ZNF451	Q9Y4E5	1061 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	CENPX	A8MT69	81 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	PSIP1	O75475	530 aa	Known RBP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	CLTB	P09497	229 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	VBP1	P61758	197 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	CYP2A13	Q16696	494 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	CERS6	Q6ZMG9	384 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	CFAP206	Q8IYR0	622 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	OR10T2	Q8NGX3	314 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	S100Z	Q8WXG8	99 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	IGSF8	Q969P0	613 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	CITED4	Q96RK1	184 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	COQ7	Q99807	217 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	WDR12	Q9GZL7	423 aa	Known RBP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	MAGEE1	Q9HCI5	957 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	C11orf16	Q9NQ32	467 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	NUDT4	Q9NZJ9	180 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	MTRR	Q9UBK8	725 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	PMF1-BGLAP	U3KQ54	211 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	ANKRD66	B4E2M5	251 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	PER2	O15055	1255 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	SLC28A2	O43868	658 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	XYLB	O75191	536 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	AP2A2	O94973	939 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	VARS	P26640	1264 aa	Known RBP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	WAS	P42768	502 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	FOXA1	P55317	472 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	TGFBI	Q15582	683 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	TXNDC8	Q6A555	127 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	FGD2	Q7Z6J4	655 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	ANKLE1	Q8NAG6	615 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	ASZ1	Q8WWH4	475 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	STON2	Q8WXE9	905 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	TMEM203	Q969S6	136 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	EXOSC8	Q96B26	276 aa	Known RBP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	TMEM39A	Q9NV64	488 aa		13.61	□□□□□ -0.23
MUC1-223	ENST00000611571	SLC22A2	O15244	555 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	WBP4	O75554	376 aa	Known RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	PGR	P06401	933 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	SPAM1	P38567	509 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	STC1	P52823	247 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	KCNAB2	Q13303	367 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	KLHL12	Q53G59	568 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	NOL9	Q5SY16	702 aa	Known RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	ELMSAN1	Q6PJG2	1045 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	KRT73	Q86Y46	540 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	PRRG3	Q9BZD7	231 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	PCDHB1	Q9Y5F3	818 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	MAGEB17	A8MXT2	336 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	FAM189A1	O60320	539 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	MAFK	O60675	156 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	TULP3	O75386	442 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	SCEL	O95171	688 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	ZBTB48	P10074	688 aa	Predicted RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	OGN	P20774	298 aa	Known RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	PROZ	P22891	400 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	ARSF	P54793	590 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	RPS3A	P61247	264 aa	Known RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	CHRNA6	Q15825	494 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms