RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 OTOFQ9HC10 1997 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 TRIM64CA6NLI5 447 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 CXCR6O00574 342 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 SLC6A4P31645 630 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 RPL9P32969 192 aaKnown RBP20.05■□□□□ 0.8
SSBP3-216ENST00000610401 GP2P55259 537 aaKnown RBP20.05■□□□□ 0.8
SSBP3-216ENST00000610401 CYP4F3Q08477 520 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 GTF2H2Q13888 395 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 PCBP1Q15365 356 aaKnown RBP eCLIP20.05■□□□□ 0.86e-7■■■□□ 18.9
SSBP3-216ENST00000610401 CTXN3Q4LDR2 81 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 FAM171A1Q5VUB5 890 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 GTF2H2CQ6P1K8 395 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 Q6ZPB1 254 aaPredicted RBP20.05■□□□□ 0.8
SSBP3-216ENST00000610401 PAGE2Q7Z2X7 111 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 ULK4Q96C45 1275 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 BTN2A3PQ96KV6 586 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 INPP5KQ9BT40 448 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 NDUFS2O75306 463 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 TSPAN12O95859 305 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 ZNF12P17014 697 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 CYP4F2P78329 520 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 EMX1Q04741 257 aaPredicted RBP20.05■□□□□ 0.8
SSBP3-216ENST00000610401 CCDC117Q8IWD4 279 aaPredicted RBP20.05■□□□□ 0.8
SSBP3-216ENST00000610401 Q8N9G6 341 aaPredicted RBP20.05■□□□□ 0.8
SSBP3-216ENST00000610401 VNN3Q9NY84 501 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 RAI2Q9Y5P3 530 aa20.05■□□□□ 0.8
SSBP3-216ENST00000610401 SLC1A7O00341 560 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 ANGPTL1O95841 491 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 RCVRNP35243 200 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 IL10RBQ08334 325 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 ZCCHC7Q8N3Z6 543 aaKnown RBP20.04■□□□□ 0.8
SSBP3-216ENST00000610401 PDPRQ8NCN5 879 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 EGLN2Q96KS0 407 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 PKMYT1Q99640 499 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 DOK1Q99704 481 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 TBCCD1Q9NVR7 557 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 SLC25A37Q9NYZ2 338 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 ABCB1P08183 1280 aaPredicted RBP20.04■□□□□ 0.8
SSBP3-216ENST00000610401 PHKG1Q16816 387 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 XKR7Q5GH72 579 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 CES5AQ6NT32 575 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 SLC39A13Q96H72 371 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 PPP1R2P1Q96PQ5 205 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 GPR63Q9BZJ6 419 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 WWOXQ9NZC7 414 aa20.04■□□□□ 0.8
SSBP3-216ENST00000610401 ELOVL7A1L3X0 281 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 CLDN25C9JDP6 229 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 F5H5T6 163 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 LSM1O15116 133 aaKnown RBP20.03■□□□□ 0.8
SSBP3-216ENST00000610401 SULT1C4O75897 302 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 FKBP9O95302 570 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 UMPSP11172 480 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 RPL17P18621 184 aaKnown RBP20.03■□□□□ 0.8
SSBP3-216ENST00000610401 GGT1P19440 569 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 TMBIM6P55061 237 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 LAIR2Q6ISS4 152 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 FKBP9P1Q75LS8 142 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 VTCN1Q7Z7D3 282 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 FAM120BQ96EK7 910 aaKnown RBP20.03■□□□□ 0.8
SSBP3-216ENST00000610401 ZNF490Q9ULM2 529 aaPredicted RBP20.03■□□□□ 0.8
SSBP3-216ENST00000610401 PCDHGA4Q9Y5G9 962 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 CPQQ9Y646 472 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 C16orf96A6NNT2 1141 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 HAS3O00219 553 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 OR7A17O14581 309 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 BCKDKO14874 412 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 GLUD1P00367 558 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 TACR2P21452 398 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 GATMP50440 423 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 SFSWAPQ12872 951 aaKnown RBP20.03■□□□□ 0.8
SSBP3-216ENST00000610401 MADCAM1Q13477 382 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 ADPRMQ3LIE5 342 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 LRRC73Q5JTD7 316 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 SLC16A12Q6ZSM3 486 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 ZNF540Q8NDQ6 660 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 LKAAEAR1Q8TD35 194 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 ZBTB18Q99592 522 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 DPH2Q9BQC3 489 aaPredicted RBP20.03■□□□□ 0.8
SSBP3-216ENST00000610401 UBA2Q9UBT2 640 aaPredicted RBP20.03■□□□□ 0.8
SSBP3-216ENST00000610401 SLC26A3P40879 764 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 DDX39BQ13838 428 aaKnown RBP20.03■□□□□ 0.8
SSBP3-216ENST00000610401 MAPRE1Q15691 268 aaKnown RBP20.03■□□□□ 0.8
SSBP3-216ENST00000610401 TTC23Q5W5X9 447 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 LRRC8DQ7L1W4 858 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 CADM3Q8N126 398 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 RORBQ92753 470 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 EBPLQ9BY08 206 aa20.03■□□□□ 0.8
SSBP3-216ENST00000610401 PRAMEF11O60813 436 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 VPS4BO75351 444 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 CPNE6O95741 557 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 TRIM32Q13049 653 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 MAP2K5Q13163 448 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 PON2Q15165 354 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 SKIV2LQ15477 1246 aaKnown RBP20.02■□□□□ 0.8
SSBP3-216ENST00000610401 GTF2IRD2BQ6EKJ0 949 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 AFTPHQ6ULP2 937 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 ZNF467Q7Z7K2 595 aaPredicted RBP20.02■□□□□ 0.8
SSBP3-216ENST00000610401 GTF2IRD2Q86UP8 949 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 ZNF683Q8IZ20 524 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 NKAPQ8N5F7 415 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms