RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 L3MBTL4Q8NA19 623 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 XXYLT1Q8NBI6 393 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 OR13A1Q8NGR1 328 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 MOSPD2Q8NHP6 518 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 VPS33AQ96AX1 596 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 HDAC11Q96DB2 347 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 ARSGQ96EG1 525 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 CFAP57Q96MR6 1250 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 ZNF583Q96ND8 569 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 PKP4Q99569 1192 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 ABHD6Q9BV23 337 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 WNT5BQ9H1J7 359 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 NOL11Q9H8H0 719 aaKnown RBP4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 CNOT10Q9H9A5 744 aaKnown RBP4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 PIH1D3Q9NQM4 214 aaKnown RBP4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 OSER1Q9NX31 292 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 DPP3Q9NY33 737 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 STK26Q9P289 416 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 CCL27Q9Y4X3 112 aa4.06□□□□□ -1.76
SMCHD1-213ENST00000609587 IGLV5-45A0A087WSX0 123 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 SPRY1O43609 319 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 BUB3O43684 328 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 ZNF500O60304 480 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 CTSVO60911 334 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 TOMM70O94826 608 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 IGHV4-39P01824 125 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 OR2T7P0C7T2 308 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 CKMT2P17540 419 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 AMD1P17707 334 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 CBLP22681 906 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 PCGF2P35227 344 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 SLC9A3P48764 834 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 HOXA1P49639 335 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 RAB28P51157 221 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 RAD23AP54725 363 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 DVL1P1P54792 670 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 GAS1P54826 345 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 ERVFC1-1P60608 527 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 MBTD1Q05BQ5 628 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 PNRC1Q12796 327 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 GAGE5Q13069 117 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 GAGE6Q13070 117 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 PSMD6Q15008 389 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 FAM133BQ5BKY9 247 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 ARMC4Q5T2S8 1044 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 CST9LP1Q5W188 147 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 WBP2NLQ6ICG8 309 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 RBPMS2Q6ZRY4 209 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 TMPRSS11FQ6ZWK6 438 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 CHST3Q7LGC8 479 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 CENPVQ7Z7K6 275 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 FAM114A1Q8IWE2 563 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 KBTBD3Q8NAB2 608 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 DMBX1Q8NFW5 382 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 OR5M8Q8NGP6 311 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 SLAMF9Q96A28 289 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 SPDL1Q96EA4 605 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 LINC00615Q96LM1 132 aaPredicted RBP4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 SEPHS2Q99611 448 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 LMF2Q9BU23 707 aaKnown RBP4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 ANKRD2Q9GZV1 360 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 ERVMER34-1Q9H9K5 563 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 SLC38A7Q9NVC3 462 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 NME7Q9Y5B8 376 aa4.05□□□□□ -1.76
SMCHD1-213ENST00000609587 A0A1W2PPI3 338 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 MEIS2O14770 477 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 SLCO2B1O94956 709 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 ATP1A1P05023 1023 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 F7P08709 466 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 CCDC175P0C221 793 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 DANCRP0C864 163 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 ACP2P11117 423 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 MTHFRP42898 656 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 TPD52P55327 224 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 RPS18P62269 152 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 ILF3Q12906 894 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 MFAP5Q13361 173 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 CAMK2DQ13557 499 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 KIR2DS3Q14952 304 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 KRBOX4Q5JUW0 171 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 GRTP1Q5TC63 336 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 KRT39Q6A163 491 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 C9orf139Q6ZV77 190 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 CCDC186Q7Z3E2 898 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 GPALPP1Q8IXQ4 340 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 FAM9BQ8IZU0 186 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 CRYBG2Q8N1P7 616 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 RFLNBQ8N5W9 214 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 MRPS27Q92552 414 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 C17orf77Q96MU5 243 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 NUP85Q9BW27 656 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 APOBEC3GQ9HC16 384 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 PRMT7Q9NVM4 692 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 PTTG2Q9NZH5 202 aa4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 FAF1Q9UNN5 650 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-213ENST00000609587 FEZF1A0PJY2 475 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 HYKKA2RU49 373 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 OR10H2O60403 315 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 SYNCRIPO60506 623 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 FYNP06241 537 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms