RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CHEK2O96017 543 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PCCBP05166 539 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ZNF8P17098 575 aaPredicted RBP12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CALB2P22676 271 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 KELP23276 732 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 MAP4P27816 1152 aaKnown RBP12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SCTRP47872 440 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SLC6A12P48065 614 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TPMTP51580 245 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CCR5P51681 352 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CORO7P57737 925 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SH3BP2P78314 561 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ARHGAP8P85298 464 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ZP2Q05996 745 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ZNF33BQ06732 778 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 GTF2H2Q13888 395 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 FGL2Q14314 439 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 UGT3A2Q3SY77 523 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 GGTA1PQ4G0N0 100 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 GTF2H2CQ6P1K8 395 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TMEM92Q6UXU6 159 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 GPRIN3Q6ZVF9 776 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 C11orf96Q7Z7L8 435 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ZNF547Q8IVP9 402 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 GJD3Q8N144 294 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CPSF7Q8N684 471 aaKnown RBP12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 DEFB123Q8N688 67 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PLA2G15Q8NCC3 412 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 DLG3Q92796 817 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CCDC138Q96M89 665 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 EGFL8Q99944 293 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 EBF4Q9BQW3 602 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 HGH1Q9BTY7 390 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 NMUR2Q9GZQ4 415 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PCED1AQ9H1Q7 454 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SLC32A1Q9H598 525 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ZBTB26Q9HCK0 441 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 MID1IP1Q9NPA3 183 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TMEM45AQ9NWC5 275 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ARL15Q9NXU5 204 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 WWOXQ9NZC7 414 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 OPTCQ9UBM4 332 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 MBD1Q9UIS9 605 aaPredicted RBP12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 DMTF1Q9Y222 760 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SLC17A4Q9Y2C5 497 aa12.02□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TBC1D3DA0A087WVF3 549 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TBC1D3IA0A087WXS9 549 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TBC1D3EA0A087X179 549 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TBC1D3KA0A087X1G2 549 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TBC1D3FA6NER0 549 aaPredicted RBP12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TBC1D3LB9A6J9 549 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SDHDO14521 159 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TAPBPO15533 448 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ZNF217O75362 1048 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 STK16O75716 305 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 WDR47O94967 919 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 RPN2P04844 631 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TBC1D3HP0C7X1 549 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 EBLN1P0CF75 366 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 IL9P15248 144 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 IGFALSP35858 605 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 MRPL19P49406 292 aaKnown RBP12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ATP4BP51164 291 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 MNAT1P51948 309 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 YPEL5P62699 121 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CTBSQ01459 385 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ACTN3Q08043 901 aaPredicted RBP12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 INPP5AQ14642 412 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SMU1Q2TAY7 513 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SLC9B1Q4ZJI4 515 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 IER5LQ5T953 404 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TBC1D3GQ6DHY5 549 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TBC1D3CQ6IPX1 549 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CHSY3Q70JA7 882 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 GOLGA7Q7Z5G4 137 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PDZD3Q86UT5 571 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ALYREFQ86V81 257 aaKnown RBP12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 AMZ2Q86W34 360 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 VRK3Q8IV63 474 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TBC1D3Q8IZP1 549 aaPredicted RBP12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 MAPK15Q8TD08 544 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 FOXJ1Q92949 421 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TMEM79Q9BSE2 394 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CCDC106Q9BWC9 280 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SLC29A3Q9BZD2 475 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ZNF385DQ9H6B1 395 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 LTB4R2Q9NPC1 389 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 UTP6Q9NYH9 597 aaKnown RBP12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 GULP1Q9UBP9 304 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TRPS1Q9UHF7 1281 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 EIF2B4Q9UI10 523 aaKnown RBP12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ACSL5Q9ULC5 683 aa12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 RRP15Q9Y3B9 282 aaKnown RBP12.01□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 KANSL1LA0AUZ9 987 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 NCF1BA6NI72 391 aaPredicted RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 NCF1CA8MVU1 366 aaPredicted RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 MYO1CO00159 1063 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CACNB4O00305 520 aaPredicted RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 FPGTO14772 594 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms