RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 CPNE3O75131 537 aaKnown RBP20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 PRSS56P0CW18 603 aa20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 ATP1B2P14415 290 aaPredicted RBP20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 PTPN4P29074 926 aa20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 CDKN1CP49918 316 aaPredicted RBP20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 PMS2P54278 862 aa20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 ZRANB3Q5FWF4 1079 aa20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 CARFQ8N187 725 aa20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 OR8K5Q8NH50 307 aa20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 HEXDCQ8WVB3 486 aa20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 MR1Q95460 341 aa20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 FERD3LQ96RJ6 166 aa20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 FARSAQ9Y285 508 aaKnown RBP20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 SPTBP11277 2137 aa20.62■□□□□ 0.89
PPFIA3-209ENST00000602783 MAST4O15021 2626 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 NAV2Q8IVL1 2488 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 C17orf113A0A1B0GUU1 675 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 SLC9B1P1A6NJY1 282 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 H7C0S8 307 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 LIASO43766 372 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 DNAJB5O75953 348 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 CDH3P22223 829 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 ACRV1P26436 265 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 SEMA5AQ13591 1074 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 OASLQ15646 514 aaKnown RBP20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 GPR33Q49SQ1 333 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 APLFQ8IW19 511 aaPredicted RBP20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 ACVR1CQ8NER5 493 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 LCN9Q8WX39 176 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 SEC14L1Q92503 715 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 TLR10Q9BXR5 811 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 SRMSQ9H3Y6 488 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 ZDHHC3Q9NYG2 299 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 PLAAQ9Y263 795 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 BTRCQ9Y297 605 aa20.61■□□□□ 0.89
PPFIA3-209ENST00000602783 PIKFYVEQ9Y2I7 2098 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 IGLV3-16A0A075B6K0 115 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 TRBV5-4A0A0C4DH59 114 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 CCDC78A2IDD5 438 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 PSMD3O43242 534 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 GPS2Q13227 327 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 UBAP2LQ14157 1087 aaKnown RBP20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 UGT8Q16880 541 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 PRAMEF17Q5VTA0 474 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 SYVN1Q86TM6 617 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 SERPINA9Q86WD7 417 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 SLC13A5Q86YT5 568 aaPredicted RBP20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 SLC38A9Q8NBW4 561 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 TRIM55Q9BYV6 548 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 FRMD8P1Q9BZ68 369 aaPredicted RBP20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 COG4Q9H9E3 785 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 C1GALT1Q9NS00 363 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 POMT2Q9UKY4 750 aa20.6■□□□□ 0.89
PPFIA3-209ENST00000602783 GSAPA4D1B5 854 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 IFRD1O00458 451 aaPredicted RBP20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 IFNB1P01574 187 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 KLK3P07288 261 aaPredicted RBP20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 TAS2R42Q7RTR8 314 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 LINC00523Q86TU6 105 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 PHC3Q8NDX5 983 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 OR52K1Q8NGK4 314 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 STYXQ8WUJ0 223 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 C1orf54Q8WWF1 131 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 THAP4Q8WY91 577 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 CDKN2AIPNLQ96HQ2 116 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 CHST8Q9H2A9 424 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 OR52A5Q9H2C5 316 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 LATS2Q9NRM7 1088 aa20.59■□□□□ 0.89
PPFIA3-209ENST00000602783 RELNP78509 3460 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 MATN2O00339 956 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 PDGFAP04085 211 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 PDHA2P29803 388 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 PRDX3P30048 256 aaKnown RBP20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 STIP1P31948 543 aaKnown RBP20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 MLLT10P55197 1068 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 CACNG1Q06432 222 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 IL10RAQ13651 578 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 CCDC38Q502W7 563 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 MEI1Q5TIA1 1274 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 ZNF517Q6ZMY9 492 aaPredicted RBP20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 PIANPQ8IYJ0 282 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 CPT1BQ92523 772 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 ALS2CR12Q96Q35 445 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 NRTNQ99748 197 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 FANCEQ9HB96 536 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 ETNK1Q9HBU6 452 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 ZNF148Q9UQR1 794 aa20.58■□□□□ 0.89
PPFIA3-209ENST00000602783 MROH6A6NGR9 719 aa20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 ERI2A8K979 691 aaKnown RBP20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 MEN1O00255 615 aa20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 BTN3A3O00478 584 aa20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 BTN3A1O00481 513 aa20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 SEC16AO15027 2179 aa20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 MSNP26038 577 aaKnown RBP20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 FDFT1P37268 417 aa20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 PREPP48147 710 aa20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 CD151P48509 253 aa20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 SRSF1Q07955 248 aaKnown RBP eCLIP20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 CDH17Q12864 832 aa20.57■□□□□ 0.88
PPFIA3-209ENST00000602783 CHAF1BQ13112 559 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms