RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 NAP1L1P55209 391 aaKnown RBP12.78□□□□□ -0.36
RPS28-204ENST00000602140 GPR33Q49SQ1 333 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 AADACL2Q6P093 401 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 MICALCLQ6ZW33 695 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 ENDOVQ8N8Q3 282 aaKnown RBP12.78□□□□□ -0.36
RPS28-204ENST00000602140 PHC3Q8NDX5 983 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 OR1L3Q8NH93 324 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 DNAJC1Q96KC8 554 aaKnown RBP12.78□□□□□ -0.36
RPS28-204ENST00000602140 LRFN5Q96NI6 719 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 C19orf43Q9BQ61 176 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 TRIM5Q9C035 493 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 OR52A5Q9H2C5 316 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 ARNT2Q9HBZ2 717 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 SYTL2Q9HCH5 934 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 ZDHHC3Q9NYG2 299 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 SNX7Q9UNH6 387 aa12.78□□□□□ -0.36
RPS28-204ENST00000602140 PCDHGA9Q9Y5G4 932 aaKnown RBP12.78□□□□□ -0.36
RPS28-204ENST00000602140 IGLV3-16A0A075B6K0 115 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 TMEM150CB9EJG8 249 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 BTN3A3O00478 584 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 BTN3A1O00481 513 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 RAB40ALP0C0E4 278 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 ST6GAL1P15907 406 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 CYP2A7P20853 494 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 PDHA2P29803 388 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 PTPN7P35236 360 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 RORAP35398 523 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 LMAN1P49257 510 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 RWDD2BP57060 319 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 NADK2Q4G0N4 442 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 ZNF658BQ4V348 819 aaPredicted RBP12.77□□□□□ -0.37
RPS28-204ENST00000602140 ZRANB3Q5FWF4 1079 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 ZNF789Q5FWF6 425 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 FAM69BQ5VUD6 431 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 ZNF449Q6P9G9 518 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 SARM1Q6SZW1 724 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 TAS2R42Q7RTR8 314 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 SERPINA9Q86WD7 417 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 SYTL1Q8IYJ3 562 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 OR52E1Q8NGJ3 308 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 ADAMTS17Q8TE56 1095 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 PPP1R2P1Q96PQ5 205 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 NLNQ9BYT8 704 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 KLHL25Q9H0H3 589 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 TFB2MQ9H5Q4 396 aaKnown RBP12.77□□□□□ -0.37
RPS28-204ENST00000602140 ACTR5Q9H9F9 607 aaPredicted RBP12.77□□□□□ -0.37
RPS28-204ENST00000602140 VPS37BQ9H9H4 285 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 MLXIPLQ9NP71 852 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 PCMTD2Q9NV79 361 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 FEZ2Q9UHY8 353 aaPredicted RBP12.77□□□□□ -0.37
RPS28-204ENST00000602140 TCFL5Q9UL49 500 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 EPN1Q9Y6I3 576 aaPredicted RBP12.77□□□□□ -0.37
RPS28-204ENST00000602140 DUSP10Q9Y6W6 482 aa12.77□□□□□ -0.37
RPS28-204ENST00000602140 TNRC6AQ8NDV7 1962 aaKnown RBP12.77□□□□□ -0.37
RPS28-204ENST00000602140 UTP20O75691 2785 aaKnown RBP12.76□□□□□ -0.37
RPS28-204ENST00000602140 TRBV5-4A0A0C4DH59 114 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 BLACEA4D250 179 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 SOWAHDA6NJG2 315 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 MAP3K7O43318 606 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 VPS4BO75351 444 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 TMEM63AO94886 807 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 TJP3O95049 919 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 CAPN1P07384 714 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 PRSS56P0CW18 603 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 PVRP15151 417 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 TPH1P17752 444 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 ACRV1P26436 265 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 CETN2P41208 172 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 UQCRFS1P47985 274 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 CD151P48509 253 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 RPA4Q13156 261 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 PRKG2Q13237 762 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 PTCHD3Q3KNS1 767 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 AMIGO1Q86WK6 493 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 KLHDC8BQ8IXV7 354 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 CLDN19Q8N6F1 224 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 CPT1CQ8TCG5 803 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 ALG3Q92685 438 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 TFGQ92734 400 aaPredicted RBP12.76□□□□□ -0.37
RPS28-204ENST00000602140 LRRC45Q96CN5 670 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 CALR3Q96L12 384 aaKnown RBP12.76□□□□□ -0.37
RPS28-204ENST00000602140 PSMG3-AS1Q96PY0 264 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 TRAPPC9Q96Q05 1148 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 HGH1Q9BTY7 390 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 PITPNM3Q9BZ71 974 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 SLC7A5P2Q9GIP4 190 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 XKR8Q9H6D3 395 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 MVB12BQ9H7P6 319 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 NLE1Q9NVX2 485 aaPredicted RBP12.76□□□□□ -0.37
RPS28-204ENST00000602140 SERTAD3Q9UJW9 196 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 VPS4AQ9UN37 437 aa12.76□□□□□ -0.37
RPS28-204ENST00000602140 C2orf74A8MZ97 194 aa12.75□□□□□ -0.37
RPS28-204ENST00000602140 H7C0S8 307 aa12.75□□□□□ -0.37
RPS28-204ENST00000602140 ZNF185O15231 689 aa12.75□□□□□ -0.37
RPS28-204ENST00000602140 MSL3P1P0C860 447 aa12.75□□□□□ -0.37
RPS28-204ENST00000602140 GNLYP22749 145 aa12.75□□□□□ -0.37
RPS28-204ENST00000602140 VAV2P52735 878 aa12.75□□□□□ -0.37
RPS28-204ENST00000602140 ITGA1P56199 1179 aa12.75□□□□□ -0.37
RPS28-204ENST00000602140 BOP1Q14137 746 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms